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This page was generated on 2021-09-24 15:06:05 -0400 (Fri, 24 Sep 2021).

INSTALL results for ChIPSeqSpike on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ChIPSeqSpike.git to
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raw results

Package 299/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPSeqSpike 1.12.0  (landing page)
Nicolas Descostes
Snapshot Date: 2021-09-23 04:50:12 -0400 (Thu, 23 Sep 2021)
git_url: https://git.bioconductor.org/packages/ChIPSeqSpike
git_branch: RELEASE_3_13
git_last_commit: 8b73542
git_last_commit_date: 2021-05-19 12:33:09 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: ChIPSeqSpike
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ChIPSeqSpike_1.12.0.tar.gz && rm -rf ChIPSeqSpike.buildbin-libdir && mkdir ChIPSeqSpike.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPSeqSpike.buildbin-libdir ChIPSeqSpike_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ChIPSeqSpike_1.12.0.zip && rm ChIPSeqSpike_1.12.0.tar.gz ChIPSeqSpike_1.12.0.zip
StartedAt: 2021-09-23 10:13:05 -0400 (Thu, 23 Sep 2021)
EndedAt: 2021-09-23 10:14:40 -0400 (Thu, 23 Sep 2021)
EllapsedTime: 94.4 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ChIPSeqSpike_1.12.0.tar.gz && rm -rf ChIPSeqSpike.buildbin-libdir && mkdir ChIPSeqSpike.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPSeqSpike.buildbin-libdir ChIPSeqSpike_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ChIPSeqSpike_1.12.0.zip && rm ChIPSeqSpike_1.12.0.tar.gz ChIPSeqSpike_1.12.0.zip
###
##############################################################################
##############################################################################


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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
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100 4081k  100 4081k    0     0  2304k      0  0:00:01  0:00:01 --:--:-- 2304k

install for i386

* installing *source* package 'ChIPSeqSpike' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ChIPSeqSpike'
    finding HTML links ... done
    ChIPSeqSpikeCore                        html  
    ChIPSeqSpikeDataset-class               html  
    ChIPSeqSpikeDatasetBoost-class          html  
    ChIPSeqSpikeDatasetList-class           html  
    ChIPSeqSpikeDatasetListBoost-class      html  
    Experiment-class                        html  
    ExperimentLoaded-class                  html  
    averageBindingValues                    html  
    bigWigFile                              html  
    boxplotSpike                            html  
    count                                   html  
    datasetList                             html  
    estimateScalingFactors                  html  
    exoCount                                html  
    exogenousScalingFactor                  html  
    experimentList                          html  
    exportBigWigs                           html  
    extractBinding                          html  
    getAverageBindingValues                 html  
    getBam                                  html  
    getBigWigFile                           html  
    getCount                                html  
    getDatasetList                          html  
    getExoCount                             html  
    getExogenousBam                         html  
    getExogenousScalingFactor               html  
    getExpName                              html  
    getExperimentList                       html  
    getExperimentListBigWigs                html  
    getLoadedData                           html  
    getMatBindingValues                     html  
    getRatio                                html  
    getScalingFactor                        html  
    inputSubtraction                        html  
    matBindingValues                        html  
    plotCor                                 html  
    plotHeatmaps                            html  
    plotProfile                             html  
    plotTransform                           html  
    ratio                                   html  
    result_data                             html  
    scaling                                 html  
    scalingFactor                           html  
    spikeDataset                            html  
    spikePipe                               html  
    spikeSummary                            html  
** building package indices
** installing vignettes
   'ChIPSeqSpike.Rmd' using 'UTF-8' 
** testing if installed package can be loaded from temporary location
Warning: Package 'ChIPSeqSpike' is deprecated and will be removed from
  Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'ChIPSeqSpike' is deprecated and will be removed from
  Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ChIPSeqSpike' ...
** testing if installed package can be loaded
Warning: Package 'ChIPSeqSpike' is deprecated and will be removed from
  Bioconductor version 3.14
* MD5 sums
packaged installation of 'ChIPSeqSpike' as ChIPSeqSpike_1.12.0.zip
* DONE (ChIPSeqSpike)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ChIPSeqSpike' successfully unpacked and MD5 sums checked