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This page was generated on 2021-09-20 15:05:08 -0400 (Mon, 20 Sep 2021).

INSTALL results for CexoR on tokay2

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raw results

Package 275/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CexoR 1.30.1  (landing page)
Pedro Madrigal
Snapshot Date: 2021-09-19 04:50:10 -0400 (Sun, 19 Sep 2021)
git_url: https://git.bioconductor.org/packages/CexoR
git_branch: RELEASE_3_13
git_last_commit: 167fbd0
git_last_commit_date: 2021-09-11 20:58:58 -0400 (Sat, 11 Sep 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: CexoR
Version: 1.30.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CexoR_1.30.1.tar.gz && rm -rf CexoR.buildbin-libdir && mkdir CexoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CexoR.buildbin-libdir CexoR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CexoR_1.30.1.zip && rm CexoR_1.30.1.tar.gz CexoR_1.30.1.zip
StartedAt: 2021-09-19 10:03:55 -0400 (Sun, 19 Sep 2021)
EndedAt: 2021-09-19 10:05:10 -0400 (Sun, 19 Sep 2021)
EllapsedTime: 74.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CexoR_1.30.1.tar.gz && rm -rf CexoR.buildbin-libdir && mkdir CexoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CexoR.buildbin-libdir CexoR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CexoR_1.30.1.zip && rm CexoR_1.30.1.tar.gz CexoR_1.30.1.zip
###
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install for i386

* installing *source* package 'CexoR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
** help
*** installing help indices
  converting help for package 'CexoR'
    finding HTML links ... done
    CexoR-internal                          html  
    CexoR-package                           html  
    cexor                                   html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/CexoR.buildbin-libdir/00LOCK-CexoR/00new/CexoR/help/cexor.html
    plotcexor                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor
  version 3.14
** testing if installed package can be loaded from final location
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor
  version 3.14
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CexoR' ...
** testing if installed package can be loaded
Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation'
Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor
  version 3.14
* MD5 sums
packaged installation of 'CexoR' as CexoR_1.30.1.zip
* DONE (CexoR)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CexoR' successfully unpacked and MD5 sums checked