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This page was generated on 2021-09-13 15:06:21 -0400 (Mon, 13 Sep 2021).

INSTALL results for CNVPanelizer on tokay2

To the developers/maintainers of the CNVPanelizer package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNVPanelizer.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 352/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNVPanelizer 1.24.0  (landing page)
Thomas Wolf
Snapshot Date: 2021-09-12 04:50:10 -0400 (Sun, 12 Sep 2021)
git_url: https://git.bioconductor.org/packages/CNVPanelizer
git_branch: RELEASE_3_13
git_last_commit: b0dc959
git_last_commit_date: 2021-05-19 12:14:20 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CNVPanelizer
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CNVPanelizer_1.24.0.tar.gz && rm -rf CNVPanelizer.buildbin-libdir && mkdir CNVPanelizer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVPanelizer.buildbin-libdir CNVPanelizer_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CNVPanelizer_1.24.0.zip && rm CNVPanelizer_1.24.0.tar.gz CNVPanelizer_1.24.0.zip
StartedAt: 2021-09-12 08:21:11 -0400 (Sun, 12 Sep 2021)
EndedAt: 2021-09-12 08:22:20 -0400 (Sun, 12 Sep 2021)
EllapsedTime: 69.1 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CNVPanelizer_1.24.0.tar.gz && rm -rf CNVPanelizer.buildbin-libdir && mkdir CNVPanelizer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVPanelizer.buildbin-libdir CNVPanelizer_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CNVPanelizer_1.24.0.zip && rm CNVPanelizer_1.24.0.tar.gz CNVPanelizer_1.24.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 87124  100 87124    0     0   551k      0 --:--:-- --:--:-- --:--:--  556k

install for i386

* installing *source* package 'CNVPanelizer' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNVPanelizer'
    finding HTML links ... done
    Background                              html  
    BedToGenomicRanges                      html  
    BootList                                html  
    CNVPanelizer-package                    html  
    CNVPanelizerFromReadCounts              html  
    CNVPanelizerFromReadCountsHelper        html  
    CollectColumnFromAllReportTables        html  
    CombinedNormalizedCounts                html  
    IndexMultipleBams                       html  
    NormalizedCounts                        html  
    PlotBootstrapDistributions              html  
    ReadCountsFromBam                       html  
    ReadXLSXToList                          html  
    ReportTables                            html  
    RunCNVPanelizerShiny                    html  
    SelectReferenceSetByInterquartileRange
                                            html  
    SelectReferenceSetByKmeans              html  
    SelectReferenceSetByPercentil           html  
    SelectReferenceSetFromReadCounts        html  
    StatusHeatmap                           html  
    WriteListToXLSX                         html  
    referenceReadCounts                     html  
    sampleReadCounts                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CNVPanelizer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNVPanelizer' as CNVPanelizer_1.24.0.zip
* DONE (CNVPanelizer)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CNVPanelizer' successfully unpacked and MD5 sums checked