Back to Multiple platform build/check report for BioC 3.13
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-09-24 15:06:05 -0400 (Fri, 24 Sep 2021).

INSTALL results for CHETAH on tokay2

To the developers/maintainers of the CHETAH package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CHETAH.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 286/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CHETAH 1.8.0  (landing page)
Jurrian de Kanter
Snapshot Date: 2021-09-23 04:50:12 -0400 (Thu, 23 Sep 2021)
git_url: https://git.bioconductor.org/packages/CHETAH
git_branch: RELEASE_3_13
git_last_commit: 1eacdb8
git_last_commit_date: 2021-05-19 12:41:54 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: CHETAH
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CHETAH_1.8.0.tar.gz && rm -rf CHETAH.buildbin-libdir && mkdir CHETAH.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CHETAH.buildbin-libdir CHETAH_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CHETAH_1.8.0.zip && rm CHETAH_1.8.0.tar.gz CHETAH_1.8.0.zip
StartedAt: 2021-09-23 09:38:11 -0400 (Thu, 23 Sep 2021)
EndedAt: 2021-09-23 09:39:13 -0400 (Thu, 23 Sep 2021)
EllapsedTime: 62.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CHETAH_1.8.0.tar.gz && rm -rf CHETAH.buildbin-libdir && mkdir CHETAH.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CHETAH.buildbin-libdir CHETAH_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CHETAH_1.8.0.zip && rm CHETAH_1.8.0.tar.gz CHETAH_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2 3650k    2 93175    0     0   451k      0  0:00:08 --:--:--  0:00:08  450k
 57 3650k   57 2090k    0     0  1727k      0  0:00:02  0:00:01  0:00:01 1726k
100 3650k  100 3650k    0     0  2066k      0  0:00:01  0:00:01 --:--:-- 2066k

install for i386

* installing *source* package 'CHETAH' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CHETAH'
    finding HTML links ... done
    CHETAHclassifier                        html  
    CHETAHshiny                             html  
    Classify                                html  
    ClassifyReference                       html  
    CorrelateReference                      html  
    PlotCHETAH                              html  
    PlotTSNE                                html  
    PlotTree                                html  
    RenameBelowNode                         html  
    headneck_ref                            html  
    input_mel                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CHETAH' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CHETAH' as CHETAH_1.8.0.zip
* DONE (CHETAH)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CHETAH' successfully unpacked and MD5 sums checked