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This page was generated on 2024-07-24 11:42 -0400 (Wed, 24 Jul 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4688
palomino8Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4284
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4455
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4404
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2191/2248HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
uSORT 1.31.0  (landing page)
Hao Chen
Snapshot Date: 2024-07-23 14:00 -0400 (Tue, 23 Jul 2024)
git_url: https://git.bioconductor.org/packages/uSORT
git_branch: devel
git_last_commit: dbd8244
git_last_commit_date: 2024-04-30 10:53:44 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


BUILD BIN results for uSORT on kjohnson3

To the developers/maintainers of the uSORT package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/uSORT.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: uSORT
Version: 1.31.0
Command: rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh uSORT_1.31.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R uSORT.buildbin-libdir
StartedAt: 2024-07-24 02:38:06 -0400 (Wed, 24 Jul 2024)
EndedAt: 2024-07-24 02:38:16 -0400 (Wed, 24 Jul 2024)
EllapsedTime: 10.1 seconds
RetCode: 0
Status:   OK  
PackageFile: uSORT_1.31.0.tgz
PackageFileSize: 1.974 MiB

Command output

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###
### Running command:
###
###   rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh uSORT_1.31.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R uSORT.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=uSORT.buildbin-libdir uSORT_1.31.0.tar.gz'
>>>>>>> 

* installing *source* package ‘uSORT’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package ‘BiocGenerics’ for request: ‘clusterEvalQ’ when loading ‘uSORT’
No methods found in package ‘BiocGenerics’ for request: ‘parCapply’ when loading ‘uSORT’
No methods found in package ‘BiocGenerics’ for request: ‘parRapply’ when loading ‘uSORT’
Note: break used in wrong context: no loop is visible 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package ‘BiocGenerics’ for request: ‘clusterEvalQ’ when loading ‘uSORT’
No methods found in package ‘BiocGenerics’ for request: ‘parCapply’ when loading ‘uSORT’
No methods found in package ‘BiocGenerics’ for request: ‘parRapply’ when loading ‘uSORT’
** testing if installed package can be loaded from final location
No methods found in package ‘BiocGenerics’ for request: ‘clusterEvalQ’ when loading ‘uSORT’
No methods found in package ‘BiocGenerics’ for request: ‘parCapply’ when loading ‘uSORT’
No methods found in package ‘BiocGenerics’ for request: ‘parRapply’ when loading ‘uSORT’
** testing if installed package keeps a record of temporary installation path
* DONE (uSORT)