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This page was generated on 2021-06-18 12:05:04 -0400 (Fri, 18 Jun 2021).

INSTALL results for pwOmics on riesling1

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raw results

Package 1430/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pwOmics 1.25.0  (landing page)
Maren Sitte
Snapshot Date: 2021-06-17 14:50:06 -0400 (Thu, 17 Jun 2021)
URL: https://git.bioconductor.org/packages/pwOmics
Branch: master
Last Commit: 47c1b5f
Last Changed Date: 2021-05-19 12:13:37 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  NO, package depends on 'STRINGdb' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: pwOmics
Version: 1.25.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pwOmics_1.25.0.tar.gz && rm -rf pwOmics.buildbin-libdir && mkdir pwOmics.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pwOmics.buildbin-libdir pwOmics_1.25.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pwOmics_1.25.0.zip && rm pwOmics_1.25.0.tar.gz pwOmics_1.25.0.zip
StartedAt: 2021-06-17 17:23:51 -0400 (Thu, 17 Jun 2021)
EndedAt: 2021-06-17 17:26:20 -0400 (Thu, 17 Jun 2021)
EllapsedTime: 149.0 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pwOmics_1.25.0.tar.gz && rm -rf pwOmics.buildbin-libdir && mkdir pwOmics.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pwOmics.buildbin-libdir pwOmics_1.25.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pwOmics_1.25.0.zip && rm pwOmics_1.25.0.tar.gz pwOmics_1.25.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  892k  100  892k    0     0  4076k      0 --:--:-- --:--:-- --:--:-- 4095k

install for i386

* installing *source* package 'pwOmics' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'pwOmics'
    finding HTML links ... done
    OmicsExampleData                        html  
    PWidentallprots                         html  
    PWidentallprotssub                      html  
    PWidenttps                              html  
    SteinerTree_cons                        html  
    TFidentallgenes                         html  
    TFidenttps                              html  
    addFeedbackLoops                        html  
    clusterTimeProfiles                     html  
    consDynamicNet                          html  
    createBiopaxnew                         html  
    createIntIDs                            html  
    findSignalingAxes                       html  
    findxneighborsoverlap                   html  
    findxnextneighbors                      html  
    genGenelists                            html  
    genGenelistssub                         html  
    genIntIDs                               html  
    generate_DSSignalingBase                html  
    genfullConsensusGraph                   html  
    getAlias_Ensemble                       html  
    getAliasfromSTRINGIDs                   html  
    getBiopaxModel                          html  
    getConsensusSTRINGIDs                   html  
    getDS_PWs                               html  
    getDS_TFs                               html  
    getDS_TGs                               html  
    getFCsplines                            html  
    getGenesIntersection                    html  
    getOmicsDataset                         html  
    getOmicsTimepoints                      html  
    getOmicsallGeneIDs                      html  
    getOmicsallProteinIDs                   html  
    getProteinIntersection                  html  
    getSTRING_graph                         html  
    getTFIntersection                       html  
    getUS_PWs                               html  
    getUS_TFs                               html  
    getUS_regulators                        html  
    get_matching_transcripts                html  
    getbipartitegraphInfo                   html  
    gettpIntersection                       html  
    identPWsofTFs                           html  
    identRegulators                         html  
    identTFTGsinPWs                         html  
    identTFs                                html  
    identifyPR                              html  
    identifyPWTFTGs                         html  
    identifyPWs                             html  
    identifyRsofTFs                         html  
    identifyTFs                             html  
    infoConsensusGraph                      html  
    loadGenelists                           html  
    loadPWs                                 html  
    plotConsDynNet                          html  
    plotConsensusGraph                      html  
    plotConsensusProfiles                   html  
    plotTimeProfileClusters                 html  
    predictFCvals                           html  
    preparePWinfo                           html  
    print.OmicsData                         html  
    pwIntOmics-package                      html  
    readOmics                               html  
    readPWdata                              html  
    readPhosphodata                         html  
    readTFdata                              html  
    readTFtargets                           html  
    selectPWsofTFs                          html  
    staticConsensusNet                      html  
    temp_correlations                       html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'pwOmics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pwOmics' as pwOmics_1.25.0.zip
* DONE (pwOmics)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'pwOmics' successfully unpacked and MD5 sums checked