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This page was generated on 2021-07-24 12:06:37 -0400 (Sat, 24 Jul 2021).

BUILD results for monocle on merida1

To the developers/maintainers of the monocle package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/monocle.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1156/2008HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
monocle 2.21.0  (landing page)
Cole Trapnell
Snapshot Date: 2021-07-23 14:50:08 -0400 (Fri, 23 Jul 2021)
URL: https://git.bioconductor.org/packages/monocle
Branch: master
Last Commit: 7da9efc
Last Changed Date: 2021-05-19 12:05:11 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  ERROR    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  ERROR    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: monocle
Version: 2.21.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data monocle
StartedAt: 2021-07-23 20:41:57 -0400 (Fri, 23 Jul 2021)
EndedAt: 2021-07-23 20:42:12 -0400 (Fri, 23 Jul 2021)
EllapsedTime: 15.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data monocle
###
##############################################################################
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* checking for file ‘monocle/DESCRIPTION’ ... OK
* preparing ‘monocle’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘monocle’ ...
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.1/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.1/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c clustering.cpp -o clustering.o
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o monocle.so RcppExports.o clustering.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /private/tmp/Rtmp3yo25Z/Rinst10c3614dab21c/00LOCK-monocle/00new/monocle/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘clusterApply’ is not exported by 'namespace:BiocGenerics'
Execution halted
ERROR: lazy loading failed for package ‘monocle’
* removing ‘/private/tmp/Rtmp3yo25Z/Rinst10c3614dab21c/monocle’
      -----------------------------------
ERROR: package installation failed