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INSTALL results for cummeRbund on riesling1

This page was generated on 2021-06-15 12:05:38 -0400 (Tue, 15 Jun 2021).

Package 412/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cummeRbund 2.35.0  (landing page)
Loyal A. Goff
Snapshot Date: 2021-06-14 14:50:10 -0400 (Mon, 14 Jun 2021)
URL: https://git.bioconductor.org/packages/cummeRbund
Branch: master
Last Commit: e18eb65
Last Changed Date: 2021-05-19 11:50:10 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
To the developers/maintainers of the cummeRbund package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cummeRbund.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

Summary

Package: cummeRbund
Version: 2.35.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/cummeRbund_2.35.0.tar.gz && rm -rf cummeRbund.buildbin-libdir && mkdir cummeRbund.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cummeRbund.buildbin-libdir cummeRbund_2.35.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL cummeRbund_2.35.0.zip && rm cummeRbund_2.35.0.tar.gz cummeRbund_2.35.0.zip
StartedAt: 2021-06-14 18:22:33 -0400 (Mon, 14 Jun 2021)
EndedAt: 2021-06-14 18:24:55 -0400 (Mon, 14 Jun 2021)
EllapsedTime: 142.4 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/cummeRbund_2.35.0.tar.gz && rm -rf cummeRbund.buildbin-libdir && mkdir cummeRbund.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cummeRbund.buildbin-libdir cummeRbund_2.35.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL cummeRbund_2.35.0.zip && rm cummeRbund_2.35.0.tar.gz cummeRbund_2.35.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100 1335k  100 1335k    0     0  6815k      0 --:--:-- --:--:-- --:--:-- 6815k

install for i386

* installing *source* package 'cummeRbund' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cummeRbund'
    finding HTML links ... done
    CuffData-class                          html  
    CuffDist-class                          html  
    CuffFeature-class                       html  
    CuffFeatureSet-class                    html  
    CuffGene-class                          html  
    CuffGeneSet-class                       html  
    CuffSet-class                           html  
    JSdist                                  html  
    JSdistFromP                             html  
    JSdistVec                               html  
    MAplot                                  html  
    PINK1                                   html  
    QCplots                                 html  
    addFeatures                             html  
    count                                   html  
    countMatrix                             html  
    csBoxplot                               html  
    csCluster                               html  
    csClusterPlot                           html  
    csDendro                                html  
    csDensity                               html  
    csDistHeat                              html  
    csHeatmap                               html  
    csScatter                               html  
    csSpecificity                           html  
    csVolcano                               html  
    cummeRbund-package                      html  
    diffData                                html  
    dimensionality                          html  
    dispersionPlot                          html  
    distValues                              html  
    exploratory                             html  
    expressionBarplot                       html  
    expressionPlot                          html  
    featureNames                            html  
    features                                html  
    findGene                                html  
    findSimilar                             html  
    fpkm                                    html  
    fpkmMatrix                              html  
    getFeatures                             html  
    getGene                                 html  
    getGeneId                               html  
    getGenes                                html  
    getLevels                               html  
    getRepLevels                            html  
    getSig                                  html  
    getSigTable                             html  
    makeprobs                               html  
    makeprobsvec                            html  
    readCufflinks                           html  
    repFpkm                                 html  
    replicates                              html  
    runInfo                                 html  
    sampleGeneSet                           html  
    sampleIDs                               html  
    samples                                 html  
    shannon.entropy                         html  
    sigMatrix                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cummeRbund' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cummeRbund' as cummeRbund_2.35.0.zip
* DONE (cummeRbund)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'cummeRbund' successfully unpacked and MD5 sums checked