Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2021-06-22 12:06:10 -0400 (Tue, 22 Jun 2021).

CHECK results for RCy3 on riesling1

To the developers/maintainers of the RCy3 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RCy3.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1489/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RCy3 2.13.3  (landing page)
Alex Pico
Snapshot Date: 2021-06-21 14:50:06 -0400 (Mon, 21 Jun 2021)
URL: https://git.bioconductor.org/packages/RCy3
Branch: master
Last Commit: 36f52f2
Last Changed Date: 2021-06-15 21:29:56 -0400 (Tue, 15 Jun 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RCy3
Version: 2.13.3
Command: D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:RCy3.install-out.txt --library=D:\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings RCy3_2.13.3.tar.gz
StartedAt: 2021-06-22 01:42:50 -0400 (Tue, 22 Jun 2021)
EndedAt: 2021-06-22 01:46:32 -0400 (Tue, 22 Jun 2021)
EllapsedTime: 222.1 seconds
RetCode: 0
Status:   OK  
CheckDir: RCy3.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:RCy3.install-out.txt --library=D:\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings RCy3_2.13.3.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'D:/biocbuild/bbs-3.14-bioc/meat/RCy3.Rcheck'
* using R version 4.1.0 (2021-05-18)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RCy3/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RCy3' version '2.13.3'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .travis.yml
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
* checking for portable file names ... OK
* checking whether package 'RCy3' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.edgeNameToEdgeSUID: no visible binding for global variable 'SUID'
.nodeNameToNodeSUID: no visible binding for global variable 'SUID'
commandsGET: no visible binding for global variable 'requester'
commandsHelp: no visible binding for global variable 'requester'
commandsPOST: no visible binding for global variable 'requester'
createNetworkFromDataFrames: no visible binding for global variable
  'SUID'
cyrestDELETE: no visible binding for global variable 'requester'
cyrestGET: no visible binding for global variable 'requester'
cyrestPOST: no visible binding for global variable 'requester'
cyrestPUT: no visible binding for global variable 'requester'
paletteColorRandom: no visible global function definition for 'rgb'
Undefined global functions or variables:
  SUID requester rgb
Consider adding
  importFrom("grDevices", "rgb")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'runTests.R'
 OK
** running tests for arch 'x64' ...
  Running 'runTests.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  'D:/biocbuild/bbs-3.14-bioc/meat/RCy3.Rcheck/00check.log'
for details.



Installation output

RCy3.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RCy3_2.13.3.tar.gz && rm -rf RCy3.buildbin-libdir && mkdir RCy3.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCy3.buildbin-libdir RCy3_2.13.3.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RCy3_2.13.3.zip && rm RCy3_2.13.3.tar.gz RCy3_2.13.3.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  918k  100  918k    0     0  3480k      0 --:--:-- --:--:-- --:--:-- 3493k

install for i386

* installing *source* package 'RCy3' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RCy3'
    finding HTML links ... done
    AddToGroup                              html  
    RCy3                                    html  
    RemoveFromGroup                         html  
    addAnnotationText                       html  
    addCyEdges                              html  
    addCyNodes                              html  
    analyzeNetwork                          html  
    applyFilter                             html  
    bundleEdges                             html  
    checkNotebookIsRunning                  html  
    checkRunningRemote                      html  
    clearEdgeBends                          html  
    clearEdgePropertyBypass                 html  
    clearNetworkCenterBypass                html  
    clearNetworkPropertyBypass              html  
    clearNetworkZoomBypass                  html  
    clearNodeOpacityBypass                  html  
    clearNodePropertyBypass                 html  
    clearSelection                          html  
    cloneNetwork                            html  
    closeSession                            html  
    collapseGroup                           html  
    commandEcho                             html  
    commandOpenDialog                       html  
    commandPause                            html  
    commandQuit                             html  
    commandRunFile                          html  
    commandSleep                            html  
    commandsAPI                             html  
    commandsGET                             html  
    commandsHelp                            html  
    commandsPOST                            html  
    commandsRun                             html  
    copyVisualStyle                         html  
    createColumnFilter                      html  
    createCompositeFilter                   html  
    createDegreeFilter                      html  
    createGraphFromNetwork                  html  
    createGroup                             html  
    createGroupByColumn                     html  
    createIgraphFromNetwork                 html  
    createNetworkFromDataFrames             html  
    createNetworkFromGraph                  html  
    createNetworkFromIgraph                 html  
    createSubnetwork                        html  
    createVisualStyle                       html  
    cybrowserClose                          html  
    cybrowserDialog                         html  
    cybrowserHide                           html  
    cybrowserList                           html  
    cybrowserSend                           html  
    cybrowserShow                           html  
    cybrowserVersion                        html  
    cyrestAPI                               html  
    cyrestDELETE                            html  
    cyrestGET                               html  
    cyrestPOST                              html  
    cyrestPUT                               html  
    cytoscapeApiVersions                    html  
    cytoscapeFreeMemory                     html  
    cytoscapeMemoryStatus                   html  
    cytoscapeNumberOfCores                  html  
    cytoscapePing                           html  
    cytoscapeVersionInfo                    html  
    deleteAllNetworks                       html  
    deleteAnnotation                        html  
    deleteDuplicateEdges                    html  
    deleteGroup                             html  
    deleteNetwork                           html  
    deleteSelectedEdges                     html  
    deleteSelectedNodes                     html  
    deleteSelfLoops                         html  
    deleteStyleMapping                      html  
    deleteTableColumn                       html  
    deleteVisualStyle                       html  
    diffusionAdvanced                       html  
    diffusionBasic                          html  
    disableApp                              html  
    doInitializeSandbox                     html  
    doRequestRemote                         html  
    doSetSandbox                            html  
    dockPanel                               html  
    dot-getDefaultSandbox                   html  
    dot-getRequester                        html  
    enableApp                               html  
    expandGroup                             html  
    exportFilters                           html  
    exportImage                             html  
    exportNetwork                           html  
    exportNetworkToNDEx                     html  
    exportVisualStyles                      html  
    findRemoteCytoscape                     html  
    fitContent                              html  
    floatPanel                              html  
    getAbsSandboxPath                       html  
    getAllEdges                             html  
    getAllNodes                             html  
    getAllStyleMappings                     html  
    getAnnotationList                       html  
    getAppInformation                       html  
    getAppStatus                            html  
    getAppUpdates                           html  
    getArrowShapes                          html  
    getAvailableApps                        html  
    getBackgroundColorDefault               html  
    getBrowserClientChannel                 html  
    getBrowserClientJs                      html  
    getCollectionList                       html  
    getCollectionName                       html  
    getCollectionNetworks                   html  
    getCollectionSuid                       html  
    getCurrentSandbox                       html  
    getCurrentSandboxName                   html  
    getCurrentSandboxPath                   html  
    getCurrentStyle                         html  
    getDefaultSandbox                       html  
    getDefaultSandboxPath                   html  
    getDisabledApps                         html  
    getEdgeColor                            html  
    getEdgeCount                            html  
    getEdgeInfo                             html  
    getEdgeLineStyle                        html  
    getEdgeLineWidth                        html  
    getEdgeProperty                         html  
    getEdgeSelectionColorDefault            html  
    getEdgeTargetArrowShape                 html  
    getFilterList                           html  
    getFirstNeighbors                       html  
    getGroupInfo                            html  
    getInstalledApps                        html  
    getJupyterBridgeURL                     html  
    getLayoutNameMapping                    html  
    getLayoutNames                          html  
    getLayoutPropertyNames                  html  
    getLayoutPropertyType                   html  
    getLayoutPropertyValue                  html  
    getLineStyles                           html  
    getNetworkCenter                        html  
    getNetworkCount                         html  
    getNetworkList                          html  
    getNetworkNDExId                        html  
    getNetworkName                          html  
    getNetworkProperty                      html  
    getNetworkSuid                          html  
    getNetworkViewSuid                      html  
    getNetworkViews                         html  
    getNetworkZoom                          html  
    getNodeColor                            html  
    getNodeCount                            html  
    getNodeHeight                           html  
    getNodePosition                         html  
    getNodeProperty                         html  
    getNodeSelectionColorDefault            html  
    getNodeShapes                           html  
    getNodeSize                             html  
    getNodeWidth                            html  
    getNotebookIsRunning                    html  
    getSandboxReinitialize                  html  
    getSelectedEdgeCount                    html  
    getSelectedEdges                        html  
    getSelectedNodeCount                    html  
    getSelectedNodes                        html  
    getStyleDependencies                    html  
    getStyleMapping                         html  
    getTableColumnNames                     html  
    getTableColumnTypes                     html  
    getTableColumns                         html  
    getTableValue                           html  
    getUninstalledApps                      html  
    getVisualPropertyDefault                html  
    getVisualPropertyNames                  html  
    getVisualStyleNames                     html  
    hideAllPanels                           html  
    hideEdges                               html  
    hideNodes                               html  
    hidePanel                               html  
    hideSelectedEdges                       html  
    hideSelectedNodes                       html  
    importFilters                           html  
    importNetworkFromFile                   html  
    importNetworkFromNDEx                   html  
    importVisualStyles                      html  
    installApp                              html  
    invertEdgeSelection                     html  
    invertNodeSelection                     html  
    layoutCopycat                           html  
    layoutNetwork                           html  
    listGroups                              html  
    loadTableData                           html  
    lockNodeDimensions                      html  
    makeSimpleGraph                         html  
    makeSimpleIgraph                        html  
    mapTableColumn                          html  
    mapVisualProperty                       html  
    matchArrowColorToEdge                   html  
    mergeNetworks                           html  
    openAppStore                            html  
    openSession                             html  
    paletteColorBrewerAccent                html  
    paletteColorBrewerBlues                 html  
    paletteColorBrewerBrBG                  html  
    paletteColorBrewerBuGn                  html  
    paletteColorBrewerBuPu                  html  
    paletteColorBrewerDark2                 html  
    paletteColorBrewerGnBu                  html  
    paletteColorBrewerGreens                html  
    paletteColorBrewerGreys                 html  
    paletteColorBrewerOrRd                  html  
    paletteColorBrewerOranges               html  
    paletteColorBrewerPRGn                  html  
    paletteColorBrewerPaired                html  
    paletteColorBrewerPastel1               html  
    paletteColorBrewerPastel2               html  
    paletteColorBrewerPiYG                  html  
    paletteColorBrewerPuBu                  html  
    paletteColorBrewerPuBuGn                html  
    paletteColorBrewerPuOr                  html  
    paletteColorBrewerPuRd                  html  
    paletteColorBrewerPurples               html  
    paletteColorBrewerRdBu                  html  
    paletteColorBrewerRdPu                  html  
    paletteColorBrewerRdYlBu                html  
    paletteColorBrewerReds                  html  
    paletteColorBrewerSet1                  html  
    paletteColorBrewerSet2                  html  
    paletteColorBrewerSet3                  html  
    paletteColorBrewerYlGn                  html  
    paletteColorBrewerYlGnBu                html  
    paletteColorBrewerYlOrBr                html  
    paletteColorBrewerYlOrRd                html  
    paletteColorRandom                      html  
    removeNodeCustomGraphics                html  
    renameNetwork                           html  
    renameTableColumn                       html  
    resetDefaultSandbox                     html  
    runningRemoteCheck                      html  
    sandboxGetFileInfo                      html  
    sandboxGetFrom                          html  
    sandboxInitializer                      html  
    sandboxRemove                           html  
    sandboxRemoveFile                       html  
    sandboxSendTo                           html  
    sandboxSet                              html  
    sandboxUrlTo                            html  
    saveSession                             html  
    selectAllEdges                          html  
    selectAllNodes                          html  
    selectEdges                             html  
    selectEdgesAdjacentToSelectedNodes      html  
    selectEdgesConnectingSelectedNodes      html  
    selectFirstNeighbors                    html  
    selectNodes                             html  
    selectNodesConnectedBySelectedEdges     html  
    setBackgroundColorDefault               html  
    setCatchupFilterSecs                    html  
    setCatchupNetworkSecs                   html  
    setCurrentNetwork                       html  
    setCurrentSandbox                       html  
    setCurrentView                          html  
    setDefaultSandbox                       html  
    setDefaultSandboxPath                   html  
    setEdgeColorBypass                      html  
    setEdgeColorDefault                     html  
    setEdgeColorMapping                     html  
    setEdgeFontFaceBypass                   html  
    setEdgeFontFaceDefault                  html  
    setEdgeFontFaceMapping                  html  
    setEdgeFontSizeBypass                   html  
    setEdgeFontSizeDefault                  html  
    setEdgeFontSizeMapping                  html  
    setEdgeLabelBypass                      html  
    setEdgeLabelColorBypass                 html  
    setEdgeLabelColorDefault                html  
    setEdgeLabelColorMapping                html  
    setEdgeLabelDefault                     html  
    setEdgeLabelMapping                     html  
    setEdgeLabelOpacityBypass               html  
    setEdgeLabelOpacityDefault              html  
    setEdgeLabelOpacityMapping              html  
    setEdgeLineStyleBypass                  html  
    setEdgeLineStyleDefault                 html  
    setEdgeLineStyleMapping                 html  
    setEdgeLineWidthBypass                  html  
    setEdgeLineWidthDefault                 html  
    setEdgeLineWidthMapping                 html  
    setEdgeOpacityBypass                    html  
    setEdgeOpacityDefault                   html  
    setEdgeOpacityMapping                   html  
    setEdgePropertyBypass                   html  
    setEdgeSelectionColorDefault            html  
    setEdgeSourceArrowColorBypass           html  
    setEdgeSourceArrowColorDefault          html  
    setEdgeSourceArrowColorMapping          html  
    setEdgeSourceArrowMapping               html  
    setEdgeSourceArrowShapeBypass           html  
    setEdgeSourceArrowShapeDefault          html  
    setEdgeSourceArrowShapeMapping          html  
    setEdgeTargetArrowColorBypass           html  
    setEdgeTargetArrowColorDefault          html  
    setEdgeTargetArrowColorMapping          html  
    setEdgeTargetArrowMapping               html  
    setEdgeTargetArrowShapeBypass           html  
    setEdgeTargetArrowShapeDefault          html  
    setEdgeTargetArrowShapeMapping          html  
    setEdgeTooltipBypass                    html  
    setEdgeTooltipDefault                   html  
    setEdgeTooltipMapping                   html  
    setLayoutProperties                     html  
    setModelPropagationSecs                 html  
    setNetworkCenterBypass                  html  
    setNetworkPropertyBypass                html  
    setNetworkZoomBypass                    html  
    setNodeBorderColorBypass                html  
    setNodeBorderColorDefault               html  
    setNodeBorderColorMapping               html  
    setNodeBorderOpacityBypass              html  
    setNodeBorderOpacityDefault             html  
    setNodeBorderOpacityMapping             html  
    setNodeBorderWidthBypass                html  
    setNodeBorderWidthDefault               html  
    setNodeBorderWidthMapping               html  
    setNodeColorBypass                      html  
    setNodeColorDefault                     html  
    setNodeColorMapping                     html  
    setNodeComboOpacityMapping              html  
    setNodeCustomBarChart                   html  
    setNodeCustomBoxChart                   html  
    setNodeCustomHeatMapChart               html  
    setNodeCustomLineChart                  html  
    setNodeCustomLinearGradient             html  
    setNodeCustomPieChart                   html  
    setNodeCustomPosition                   html  
    setNodeCustomRadialGradient             html  
    setNodeCustomRingChart                  html  
    setNodeFillOpacityBypass                html  
    setNodeFillOpacityDefault               html  
    setNodeFillOpacityMapping               html  
    setNodeFontFaceBypass                   html  
    setNodeFontFaceDefault                  html  
    setNodeFontFaceMapping                  html  
    setNodeFontSizeBypass                   html  
    setNodeFontSizeDefault                  html  
    setNodeFontSizeMapping                  html  
    setNodeHeightBypass                     html  
    setNodeHeightDefault                    html  
    setNodeHeightMapping                    html  
    setNodeLabelBypass                      html  
    setNodeLabelColorBypass                 html  
    setNodeLabelColorDefault                html  
    setNodeLabelColorMapping                html  
    setNodeLabelDefault                     html  
    setNodeLabelMapping                     html  
    setNodeLabelOpacityBypass               html  
    setNodeLabelOpacityDefault              html  
    setNodeLabelOpacityMapping              html  
    setNodeOpacityBypass                    html  
    setNodePropertyBypass                   html  
    setNodeSelectionColorDefault            html  
    setNodeShapeBypass                      html  
    setNodeShapeDefault                     html  
    setNodeShapeMapping                     html  
    setNodeSizeBypass                       html  
    setNodeSizeDefault                      html  
    setNodeSizeMapping                      html  
    setNodeTooltipBypass                    html  
    setNodeTooltipDefault                   html  
    setNodeTooltipMapping                   html  
    setNodeWidthBypass                      html  
    setNodeWidthDefault                     html  
    setNodeWidthMapping                     html  
    setNotebookIsRunning                    html  
    setSandboxReinitialize                  html  
    setStyleDependencies                    html  
    setVisualPropertyDefault                html  
    setVisualStyle                          html  
    spoofResponse-class                     html  
    syncNodeCustomGraphicsSize              html  
    toggleGraphicsDetails                   html  
    unhideAll                               html  
    unhideEdges                             html  
    unhideNodes                             html  
    uninstallApp                            html  
    updateApp                               html  
    updateNetworkInNDEx                     html  
    updateStyleDefaults                     html  
    updateStyleMapping                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RCy3' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RCy3' as RCy3_2.13.3.zip
* DONE (RCy3)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'RCy3' successfully unpacked and MD5 sums checked

Tests output

RCy3.Rcheck/tests_i386/runTests.Rout


R version 4.1.0 (2021-05-18) -- "Camp Pontanezen"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # tests disabled as the Bioconductor build system no longer supports interactive sessions
> #require(RCy3) || stop("unable to load RCy3")
> #BiocGenerics:::testPackage('RCy3')
> 
> proc.time()
   user  system elapsed 
   0.10    0.01    0.10 

RCy3.Rcheck/tests_x64/runTests.Rout


R version 4.1.0 (2021-05-18) -- "Camp Pontanezen"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # tests disabled as the Bioconductor build system no longer supports interactive sessions
> #require(RCy3) || stop("unable to load RCy3")
> #BiocGenerics:::testPackage('RCy3')
> 
> proc.time()
   user  system elapsed 
   0.10    0.01    0.10 

Example timings

RCy3.Rcheck/examples_i386/RCy3-Ex.timings

nameusersystemelapsed
AddToGroup000
RemoveFromGroup000
addAnnotationText000
addCyEdges000
addCyNodes000
analyzeNetwork000
applyFilter000
bundleEdges0.000.010.02
checkNotebookIsRunning000
checkRunningRemote000
clearEdgeBends000
clearEdgePropertyBypass000
clearNetworkCenterBypass000
clearNetworkPropertyBypass000
clearNetworkZoomBypass000
clearNodeOpacityBypass000
clearNodePropertyBypass000
clearSelection000
cloneNetwork000
closeSession000
collapseGroup000
commandEcho000
commandOpenDialog000
commandPause000
commandQuit000
commandRunFile000
commandSleep000
commandsAPI000
commandsGET000
commandsHelp000
commandsPOST000
commandsRun000
copyVisualStyle000
createColumnFilter000
createCompositeFilter000
createDegreeFilter000
createGraphFromNetwork000
createGroup000
createGroupByColumn000
createIgraphFromNetwork000
createNetworkFromDataFrames000
createNetworkFromGraph000
createNetworkFromIgraph000
createSubnetwork000
createVisualStyle000
cybrowserClose000
cybrowserDialog000
cybrowserHide000
cybrowserList000
cybrowserSend000
cybrowserShow000
cybrowserVersion000
cyrestAPI000
cyrestDELETE000
cyrestGET000
cyrestPOST000
cyrestPUT000
cytoscapeApiVersions000
cytoscapeFreeMemory000
cytoscapeMemoryStatus000
cytoscapeNumberOfCores000
cytoscapePing000
cytoscapeVersionInfo000
deleteAllNetworks000
deleteAnnotation000
deleteDuplicateEdges000
deleteGroup000
deleteNetwork000
deleteSelectedEdges000
deleteSelectedNodes000
deleteSelfLoops000
deleteStyleMapping000
deleteTableColumn000
deleteVisualStyle0.000.020.02
diffusionAdvanced000
diffusionBasic000
disableApp000
doInitializeSandbox000
doRequestRemote000
doSetSandbox000
dockPanel000
dot-getDefaultSandbox000
dot-getRequester000
enableApp000
expandGroup000
exportFilters000
exportImage000
exportNetwork000
exportNetworkToNDEx000
exportVisualStyles000
findRemoteCytoscape000
fitContent000
floatPanel000
getAbsSandboxPath000
getAllEdges000
getAllNodes000
getAllStyleMappings000
getAnnotationList000
getAppInformation000
getAppStatus000
getAppUpdates000
getArrowShapes000
getAvailableApps000
getBackgroundColorDefault000
getBrowserClientChannel000
getBrowserClientJs000
getCollectionList000
getCollectionName000
getCollectionNetworks000
getCollectionSuid000
getCurrentSandbox000
getCurrentSandboxName000
getCurrentSandboxPath000
getCurrentStyle000
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RCy3.Rcheck/examples_x64/RCy3-Ex.timings

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