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INSTALL results for RBioinf on riesling1

This page was generated on 2021-06-16 12:05:12 -0400 (Wed, 16 Jun 2021).

Package 1472/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RBioinf 1.53.0  (landing page)
Robert Gentleman
Snapshot Date: 2021-06-15 14:50:06 -0400 (Tue, 15 Jun 2021)
URL: https://git.bioconductor.org/packages/RBioinf
Branch: master
Last Commit: 1337231
Last Changed Date: 2021-05-19 11:40:41 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
To the developers/maintainers of the RBioinf package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RBioinf.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

Summary

Package: RBioinf
Version: 1.53.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RBioinf_1.53.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.53.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.53.0.zip && rm RBioinf_1.53.0.tar.gz RBioinf_1.53.0.zip
StartedAt: 2021-06-15 16:32:57 -0400 (Tue, 15 Jun 2021)
EndedAt: 2021-06-15 16:35:28 -0400 (Tue, 15 Jun 2021)
EllapsedTime: 151.3 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RBioinf_1.53.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.53.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.53.0.zip && rm RBioinf_1.53.0.tar.gz RBioinf_1.53.0.zip
###
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100 3430k  100 3430k    0     0  10.3M      0 --:--:-- --:--:-- --:--:-- 10.3M

install for i386

* installing *source* package 'RBioinf' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c Rinit.c -o Rinit.o
"C:/rtools40/mingw32/bin/"gcc  -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c rand.c -o rand.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.14-bioc/R/bin/i386 -lR
installing to D:/biocbuild/bbs-3.14-bioc/meat/RBioinf.buildbin-libdir/00LOCK-RBioinf/00new/RBioinf/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RBioinf'
    finding HTML links ... done
    Rcal                                    html  
    S4Help                                  html  
    asSimpleVector                          html  
    classList2Graph                         html  
    computeClassLinearization               html  
    printWithNumbers                        html  
    randDNA                                 html  
    simplePVect                             html  
    simpleRand                              html  
    simpleSort                              html  
    subClassNames                           html  
    superClasses                            html  
    traceMethods                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RBioinf' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c Rinit.c -o Rinit.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c rand.c -o rand.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.14-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.14-bioc/meat/RBioinf.buildbin-libdir/RBioinf/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RBioinf' as RBioinf_1.53.0.zip
* DONE (RBioinf)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'RBioinf' successfully unpacked and MD5 sums checked