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This page was generated on 2021-06-22 12:06:08 -0400 (Tue, 22 Jun 2021).

BUILD results for PoTRA on riesling1

To the developers/maintainers of the PoTRA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PoTRA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1380/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PoTRA 1.9.0  (landing page)
Valentin Dinu
Snapshot Date: 2021-06-21 14:50:06 -0400 (Mon, 21 Jun 2021)
URL: https://git.bioconductor.org/packages/PoTRA
Branch: master
Last Commit: 65e856a
Last Changed Date: 2021-05-19 12:41:52 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: PoTRA
Version: 1.9.0
Command: chmod a+r PoTRA -R && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data PoTRA
StartedAt: 2021-06-21 21:23:50 -0400 (Mon, 21 Jun 2021)
EndedAt: 2021-06-21 21:26:19 -0400 (Mon, 21 Jun 2021)
EllapsedTime: 148.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   chmod a+r PoTRA -R && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data PoTRA
###
##############################################################################
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* checking for file 'PoTRA/DESCRIPTION' ... OK
* preparing 'PoTRA':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'PoTRA.Rmd' using rmarkdown
* installing *source* package 'repmis' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'repmis'
    finding HTML links ... done
    InstallOldPackages                      html  
    LoadandCite                             html  
    git_stamp                               html  
    scan_https                              html  
    set_valid_wd                            html  
    source_DropboxData                      html  
    source_XlsxData                         html  
    finding level-2 HTML links ... done

    source_data                             html  
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* DONE (repmis)
Quitting from lines 223-227 (PoTRA.Rmd) 
Error: processing vignette 'PoTRA.Rmd' failed with diagnostics:
no database "biocarta" for species "hsapiens"
--- failed re-building 'PoTRA.Rmd'

SUMMARY: processing the following file failed:
  'PoTRA.Rmd'

Error: Vignette re-building failed.
Execution halted