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INSTALL results for MIGSA on riesling1

This page was generated on 2021-06-16 12:05:07 -0400 (Wed, 16 Jun 2021).

Package 1103/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MIGSA 1.17.0  (landing page)
Juan C. Rodriguez
Snapshot Date: 2021-06-15 14:50:06 -0400 (Tue, 15 Jun 2021)
URL: https://git.bioconductor.org/packages/MIGSA
Branch: master
Last Commit: a68b34c
Last Changed Date: 2021-05-19 12:26:14 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  NO, package depends on 'GOstats' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
To the developers/maintainers of the MIGSA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MIGSA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

Summary

Package: MIGSA
Version: 1.17.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MIGSA_1.17.0.tar.gz && rm -rf MIGSA.buildbin-libdir && mkdir MIGSA.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MIGSA.buildbin-libdir MIGSA_1.17.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MIGSA_1.17.0.zip && rm MIGSA_1.17.0.tar.gz MIGSA_1.17.0.zip
StartedAt: 2021-06-15 17:36:44 -0400 (Tue, 15 Jun 2021)
EndedAt: 2021-06-15 17:39:22 -0400 (Tue, 15 Jun 2021)
EllapsedTime: 158.2 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MIGSA_1.17.0.tar.gz && rm -rf MIGSA.buildbin-libdir && mkdir MIGSA.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MIGSA.buildbin-libdir MIGSA_1.17.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MIGSA_1.17.0.zip && rm MIGSA_1.17.0.tar.gz MIGSA_1.17.0.zip
###
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100 1626k  100 1626k    0     0  5229k      0 --:--:-- --:--:-- --:--:-- 5229k

install for i386

* installing *source* package 'MIGSA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MIGSA'
    finding HTML links ... done
    ExprData-class                          html  
    FitOptions-class                        html  
    GSEAparams-class                        html  
    Genesets-as.Genesets                    html  
    Genesets-enrichr                        html  
    Genesets-geneSetsFromFile               html  
    Genesets-loadGo                         html  
    IGSAinput-class                         html  
    IGSAinput-getDEGenes                    html  
    IGSAinput-getterSetters                 html  
REDIRECT:topic	 name<- -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 name<-,IGSAinput-method -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.14-bioc/meat/MIGSA.buildbin-libdir/00LOCK-MIGSA/00new/MIGSA/help/fitOptions.html
REDIRECT:topic	 fitOptions<- -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 fitOptions<-,IGSAinput-method -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 exprData<- -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 exprData<-,IGSAinput-method -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 geneSetsList<- -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 geneSetsList<-,IGSAinput-method -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.14-bioc/meat/MIGSA.buildbin-libdir/00LOCK-MIGSA/00new/MIGSA/help/gseaParams.html
REDIRECT:topic	 gseaParams<- -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 gseaParams<-,IGSAinput-method -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 seaParams<- -> IGSAinput-getterSetters.html [ FAIL ]
REDIRECT:topic	 seaParams<-,IGSAinput-method -> IGSAinput-getterSetters.html [ FAIL ]
    MIGSA                                   html  
    MIGSAPackage                            html  
    MIGSAmGSZ                               html  
    MIGSAres-GoAnalysis                     html  
    MIGSAres-class                          html  
    MIGSAres-common                         html  
    MIGSAres-genesManipulation              html  
    MIGSAres-getAdditionalInfo              html  
    MIGSAres-plots                          html  
    MIGSAres-setEnrCutoff                   html  
    SEAparams-class                         html  
REDIRECT:topic	 Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.14-bioc/meat/MIGSA.buildbin-libdir/00LOCK-MIGSA/00new/MIGSA/help/SEAparams.html
    bcMigsaRes                              html  
    migsaRes                                html  
    summaryFunctions                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MIGSA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MIGSA' as MIGSA_1.17.0.zip
* DONE (MIGSA)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'MIGSA' successfully unpacked and MD5 sums checked