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INSTALL results for Category on riesling1

This page was generated on 2021-06-16 12:04:56 -0400 (Wed, 16 Jun 2021).

Package 238/1993HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Category 2.59.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-06-15 14:50:06 -0400 (Tue, 15 Jun 2021)
URL: https://git.bioconductor.org/packages/Category
Branch: master
Last Commit: 0a1b891
Last Changed Date: 2021-05-19 11:35:55 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
To the developers/maintainers of the Category package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Category.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

Summary

Package: Category
Version: 2.59.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Category_2.59.0.tar.gz && rm -rf Category.buildbin-libdir && mkdir Category.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Category.buildbin-libdir Category_2.59.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Category_2.59.0.zip && rm Category_2.59.0.tar.gz Category_2.59.0.zip
StartedAt: 2021-06-15 17:31:12 -0400 (Tue, 15 Jun 2021)
EndedAt: 2021-06-15 17:33:38 -0400 (Tue, 15 Jun 2021)
EllapsedTime: 146.3 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Category_2.59.0.tar.gz && rm -rf Category.buildbin-libdir && mkdir Category.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Category.buildbin-libdir Category_2.59.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Category_2.59.0.zip && rm Category_2.59.0.tar.gz Category_2.59.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0  163k    0  1137    0     0  22294      0  0:00:07 --:--:--  0:00:07 21865
100  163k  100  163k    0     0   990k      0 --:--:-- --:--:-- --:--:--  984k

install for i386

* installing *source* package 'Category' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Category'
    finding HTML links ... done
    Category-defunct                        html  
    ChrBandTree-class                       html  
    ChrMapHyperGParams-class                html  
REDIRECT:topic	 conditional<-,ChrMapHyperGParams,logical-method -> ChrMapHyperGParams-class.html [ FAIL ]
    ChrMapHyperGResult-class                html  
    ChrMapLinearMParams-class               html  
    ChrMapLinearMResult-class               html  
    DatPkg-class                            html  
    GOHyperGParams-class                    html  
REDIRECT:topic	 conditional<-,GOHyperGParams,logical-method -> GOHyperGParams-class.html [ FAIL ]
REDIRECT:topic	 ontology<-,GOHyperGParams,character-method -> GOHyperGParams-class.html [ FAIL ]
    GSEAGOHyperGParams                      html  
    HyperGParams-class                      html  
REDIRECT:topic	 conditional<- -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 geneIds<- -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 ontology<- -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 pvalueCutoff<- -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 testDirection<- -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 geneIds<-,HyperGParams,logical-method -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 geneIds<-,HyperGParams,ANY-method -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 annotation<-,HyperGParams,character-method -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 pvalueCutoff<-,HyperGParams-method -> HyperGParams-class.html [ FAIL ]
REDIRECT:topic	 testDirection<-,HyperGParams-method -> HyperGParams-class.html [ FAIL ]
    HyperGResult-accessors                  html  
    HyperGResult-class                      html  
    HyperGResultBase-class                  html  
    KEGGHyperGParams-class                  html  
    LinearMParams-class                     html  
REDIRECT:topic	 annotation<-,LinearMParams,character-method -> LinearMParams-class.html [ FAIL ]
REDIRECT:topic	 conditional<-,LinearMParams,logical-method -> LinearMParams-class.html [ FAIL ]
REDIRECT:topic	 geneIds<-,LinearMParams,ANY-method -> LinearMParams-class.html [ FAIL ]
REDIRECT:topic	 pvalueCutoff<-,LinearMParams-method -> LinearMParams-class.html [ FAIL ]
REDIRECT:topic	 testDirection<-,LinearMParams-method -> LinearMParams-class.html [ FAIL ]
    LinearMResult-class                     html  
    LinearMResultBase-class                 html  
    MAPAmat                                 html  
    NewChrBandTree                          html  
    OBOHyperGParams-class                   html  
REDIRECT:topic	 conditional<-,OBOHyperGParams,logical-method -> OBOHyperGParams-class.html [ FAIL ]
    applyByCategory                         html  
    cateGOryMatrix                          html  
    categoryToEntrezBuilder                 html  
    cb_contingency                          html  
    cb_parse_band_Hs                        html  
    cb_parse_band_Mm                        html  
    cb_test                                 html  
    effectSize                              html  
    exampleLevels                           html  
    findAMstats                             html  
    getPathNames                            html  
    gseattperm                              html  
    hyperGTest                              html  
    hyperg                                  html  
    linearMTest                             html  
    local_test_factory                      html  
    makeChrBandGraph                        html  
    makeEBcontr                             html  
    makeValidParams                         html  
    probes2MAP                              html  
    probes2Path                             html  
    tree_visitor                            html  
    ttperm                                  html  
    universeBuilder                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Category' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Category' as Category_2.59.0.zip
* DONE (Category)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'Category' successfully unpacked and MD5 sums checked