Back to Multiple platform build/check report for BioC 3.19:   simplified   long
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This page was generated on 2024-05-29 11:34:38 -0400 (Wed, 29 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4753
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4518
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 1962/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.62.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2024-05-28 14:00:10 -0400 (Tue, 28 May 2024)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: RELEASE_3_19
git_last_commit: 1456ab9
git_last_commit_date: 2024-04-30 10:18:03 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64
0127
0127
00522
lconwaymacOS 12.7.1 Monterey / x86_64
0126
0126
00521
0026
Package 1/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.26.0  (landing page)
Eivind Valen
git_last_commit: 0d1f719
git_last_commit_date: 2024-04-30 11:00:30 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 2/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.28.0  (landing page)
Thomas Carroll
git_last_commit: 536aad0
git_last_commit_date: 2024-04-30 10:57:34 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 3/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.42.0  (landing page)
Kemal Akman
git_last_commit: 4cbe33f
git_last_commit_date: 2024-04-30 10:34:47 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 4/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.10.0  (landing page)
Wenjie Sun
git_last_commit: c3282ec
git_last_commit_date: 2024-04-30 11:38:56 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 5/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.54.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: c02cb58
git_last_commit_date: 2024-04-30 10:20:06 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 6/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.58.0  (landing page)
Peter Humburg
git_last_commit: e89adb7
git_last_commit_date: 2024-04-30 10:20:50 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 7/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.58.0  (landing page)
Peter Humburg
git_last_commit: 90befd0
git_last_commit_date: 2024-04-30 10:20:27 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 8/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.6.0  (landing page)
Jianqiang Sun
git_last_commit: 2ee6670
git_last_commit_date: 2024-04-30 11:45:03 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 9/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.32.0  (landing page)
Benjamin Callahan
git_last_commit: 125b53b
git_last_commit_date: 2024-04-30 10:48:37 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 10/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.40.0  (landing page)
Nicolas Delhomme
git_last_commit: 3956fcf
git_last_commit_date: 2024-04-30 10:26:40 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  ERROR    ERROR  skipped
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 11/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.38.0  (landing page)
Davide Risso
git_last_commit: aab2daa
git_last_commit_date: 2024-04-30 10:25:33 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 12/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.26.0  (landing page)
Zheng Wei
git_last_commit: 222623c
git_last_commit_date: 2024-04-30 11:02:36 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 13/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.22.0  (landing page)
Leandro Roser
git_last_commit: 4a8e37c
git_last_commit_date: 2024-04-30 11:06:58 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 14/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
girafe 1.56.0  (landing page)
J. Toedling
git_last_commit: 56d29af
git_last_commit_date: 2024-04-30 10:21:35 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 15/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.40.0  (landing page)
Borbala Mifsud
git_last_commit: 6818add
git_last_commit_date: 2024-04-30 11:15:45 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 16/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HTSeqGenie 4.34.0  (landing page)
Jens Reeder
git_last_commit: e25c9ee
git_last_commit_date: 2024-04-30 10:29:18 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64... NOT SUPPORTED ...
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 17/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.22.0  (landing page)
Vivek Bhardwaj
git_last_commit: 4a36367
git_last_commit_date: 2024-04-30 11:07:20 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 18/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.28.0  (landing page)
Mike Smith
git_last_commit: d4e3dbc
git_last_commit_date: 2024-04-30 10:44:22 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 19/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.36.0  (landing page)
Alba Sala
git_last_commit: df2686d
git_last_commit_date: 2024-04-30 10:25:01 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 20/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.54.0  (landing page)
Daniel Beck
git_last_commit: f27c631
git_last_commit_date: 2024-04-30 10:22:44 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 21/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.44.0  (landing page)
Michael Stadler
git_last_commit: 7508987
git_last_commit_date: 2024-04-30 10:30:09 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 22/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.54.0  (landing page)
Hans-Ulrich Klein
git_last_commit: 0e73194
git_last_commit_date: 2024-04-30 10:22:58 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 23/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.38.0  (landing page)
Welliton Souza
git_last_commit: 68a2092
git_last_commit_date: 2024-04-30 10:40:19 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 24/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.44.0  (landing page)
Christoph Bartenhagen
git_last_commit: ba4e5f2
git_last_commit_date: 2024-04-30 10:30:03 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 25/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.22.0  (landing page)
Zhe Wang
git_last_commit: 0c32919
git_last_commit_date: 2024-04-30 11:07:52 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 26/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.38.0  (landing page)
Samuel Granjeaud
git_last_commit: 1d51341
git_last_commit_date: 2024-04-30 10:21:25 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 27/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.10.0  (landing page)
Thomas Girke
git_last_commit: 4521e19
git_last_commit_date: 2024-04-30 10:38:46 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here
Package 28/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.14.0  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: 0cd2846
git_last_commit_date: 2024-04-30 11:25:59 -0400
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here