Back to Build/check report for BioC 3.14 experimental data
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-12-01 18:35:25 -0500 (Wed, 01 Dec 2021).

CHECK results for chromstaRData on nebbiolo2

To the developers/maintainers of the chromstaRData package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 61/408HostnameOS / ArchINSTALLBUILDCHECK
chromstaRData 1.20.0  (landing page)
Aaron Taudt
Snapshot Date: 2021-12-01 08:30:01 -0500 (Wed, 01 Dec 2021)
git_url: https://git.bioconductor.org/packages/chromstaRData
git_branch: RELEASE_3_14
git_last_commit: a207501
git_last_commit_date: 2021-10-26 12:25:56 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: chromstaRData
Version: 1.20.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:chromstaRData.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings chromstaRData_1.20.0.tar.gz
StartedAt: 2021-12-01 15:11:29 -0500 (Wed, 01 Dec 2021)
EndedAt: 2021-12-01 15:11:44 -0500 (Wed, 01 Dec 2021)
EllapsedTime: 15.8 seconds
RetCode: 0
Status:   OK  
CheckDir: chromstaRData.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:chromstaRData.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings chromstaRData_1.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.14-data-experiment/meat/chromstaRData.Rcheck’
* using R version 4.1.2 (2021-11-01)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘chromstaRData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘chromstaRData’ version ‘1.20.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘chromstaRData’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 141.3Mb
  sub-directories of 1Mb or more:
    extdata  141.1Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.14-data-experiment/meat/chromstaRData.Rcheck/00check.log’
for details.



Installation output

chromstaRData.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL chromstaRData
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘chromstaRData’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (chromstaRData)

Tests output


Example timings