Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

This page was generated on 2022-01-14 13:07:19 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for topGO on tokay2


To the developers/maintainers of the topGO package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/topGO.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1974/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
topGO 2.46.0  (landing page)
Adrian Alexa
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/topGO
git_branch: RELEASE_3_14
git_last_commit: 2bfa9df
git_last_commit_date: 2021-10-26 11:50:53 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: topGO
Version: 2.46.0
Command: rm -rf topGO.buildbin-libdir && mkdir topGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=topGO.buildbin-libdir topGO_2.46.0.tar.gz
StartedAt: 2022-01-14 06:46:58 -0500 (Fri, 14 Jan 2022)
EndedAt: 2022-01-14 06:47:35 -0500 (Fri, 14 Jan 2022)
EllapsedTime: 37.0 seconds
RetCode: 0
Status:   OK  
PackageFile: topGO_2.46.0.zip
PackageFileSize: 2.102 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf topGO.buildbin-libdir && mkdir topGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=topGO.buildbin-libdir topGO_2.46.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'topGO' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'topGO'
    finding HTML links ... done
    GOTests                                 html  
    GOdata                                  html  
    annFUN                                  html  
    classicCount-class                      html  
    classicExpr-class                       html  
    classicScore-class                      html  
    dagFunctions                            html  
    diagnosticMethods                       html  
    elimCount-class                         html  
    elimExpr-class                          html  
    elimScore-class                         html  
    geneList                                html  
    getPvalues                              html  
    getSigGroups                            html  
    groupGOTerms                            html  
    groupStats-class                        html  
    inducedGraph                            html  
    parentChild-class                       html  
    printGraph-methods                      html  
    topGO-package                           html  
    topGOdata-class                         html  
    topGOresult-class                       html  
    weightCount-class                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package can be loaded from final location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'topGO' ...
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
* MD5 sums
packaged installation of 'topGO' as topGO_2.46.0.zip
* DONE (topGO)