Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-26 13:07:11 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for rCGH on tokay2


To the developers/maintainers of the rCGH package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rCGH.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1544/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rCGH 1.24.0  (landing page)
Frederic Commo
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/rCGH
git_branch: RELEASE_3_14
git_last_commit: ee2a9d3
git_last_commit_date: 2021-10-26 12:21:28 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: rCGH
Version: 1.24.0
Command: rm -rf rCGH.buildbin-libdir && mkdir rCGH.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rCGH.buildbin-libdir rCGH_1.24.0.tar.gz
StartedAt: 2022-01-26 06:52:41 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 06:54:05 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 83.9 seconds
RetCode: 0
Status:   OK  
PackageFile: rCGH_1.24.0.zip
PackageFileSize: 4.938 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf rCGH.buildbin-libdir && mkdir rCGH.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rCGH.buildbin-libdir rCGH_1.24.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'rCGH' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rCGH'
    finding HTML links ... done
    AllAccessors                            html  
    EMnormalize                             html  
    adjustSignal                            html  
    agilentDB                               html  
    byGeneTable                             html  
    hg18                                    html  
    hg19                                    html  
    hg38                                    html  
    multiplot                               html  
    plotDensity                             html  
    plotLOH                                 html  
    plotProfile                             html  
    rCGH-Agilent-class                      html  
    rCGH-SNP6-class                         html  
    rCGH-class                              html  
    rCGH-cytoScan-class                     html  
    rCGH-generic-class                      html  
    rCGH-oncoScan-class                     html  
    rCGH-package                            html  
    readAffyCytoScan                        html  
    readAffyOncoScan                        html  
    readAffySNP6                            html  
    readAgilent                             html  
    readGeneric                             html  
    recenter                                html  
    segmentCGH                              html  
    setInfo                                 html  
    show-methods                            html  
    view                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'rCGH' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rCGH' as rCGH_1.24.0.zip
* DONE (rCGH)