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This page was generated on 2022-01-24 13:06:43 -0500 (Mon, 24 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for pcaExplorer on tokay2


To the developers/maintainers of the pcaExplorer package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pcaExplorer.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1383/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pcaExplorer 2.20.1  (landing page)
Federico Marini
Snapshot Date: 2022-01-23 01:55:04 -0500 (Sun, 23 Jan 2022)
git_url: https://git.bioconductor.org/packages/pcaExplorer
git_branch: RELEASE_3_14
git_last_commit: 33bbc50
git_last_commit_date: 2021-12-01 16:29:59 -0500 (Wed, 01 Dec 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: pcaExplorer
Version: 2.20.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pcaExplorer_2.20.1.tar.gz && rm -rf pcaExplorer.buildbin-libdir && mkdir pcaExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pcaExplorer.buildbin-libdir pcaExplorer_2.20.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pcaExplorer_2.20.1.zip && rm pcaExplorer_2.20.1.tar.gz pcaExplorer_2.20.1.zip
StartedAt: 2022-01-23 07:37:37 -0500 (Sun, 23 Jan 2022)
EndedAt: 2022-01-23 07:39:49 -0500 (Sun, 23 Jan 2022)
EllapsedTime: 131.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pcaExplorer_2.20.1.tar.gz && rm -rf pcaExplorer.buildbin-libdir && mkdir pcaExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pcaExplorer.buildbin-libdir pcaExplorer_2.20.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pcaExplorer_2.20.1.zip && rm pcaExplorer_2.20.1.tar.gz pcaExplorer_2.20.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  9 22.3M    9 2118k    0     0  4399k      0  0:00:05 --:--:--  0:00:05 4395k
 56 22.3M   56 12.6M    0     0  8745k      0  0:00:02  0:00:01  0:00:01 8742k
100 22.3M  100 22.3M    0     0  9821k      0  0:00:02  0:00:02 --:--:-- 9824k

install for i386

* installing *source* package 'pcaExplorer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'pcaExplorer'
    finding HTML links ... done
    correlatePCs                            html  
    distro_expr                             html  
    finding level-2 HTML links ... done

    geneprofiler                            html  
    genespca                                html  
    get_annotation                          html  
    get_annotation_orgdb                    html  
    hi_loadings                             html  
    limmaquickpca2go                        html  
    makeExampleDESeqDataSet_multifac        html  
    pair_corr                               html  
    pca2go                                  html  
    pcaExplorer-pkg                         html  
    pcaExplorer                             html  
    pcaplot                                 html  
    pcaplot3d                               html  
    pcascree                                html  
    plotPCcorrs                             html  
    topGOtable                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'pcaExplorer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pcaExplorer' as pcaExplorer_2.20.1.zip
* DONE (pcaExplorer)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'pcaExplorer' successfully unpacked and MD5 sums checked