Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-26 13:06:59 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for muscat on tokay2


To the developers/maintainers of the muscat package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/muscat.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1253/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
muscat 1.8.1  (landing page)
Helena L. Crowell
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/muscat
git_branch: RELEASE_3_14
git_last_commit: 06006c2
git_last_commit_date: 2022-01-14 03:51:16 -0500 (Fri, 14 Jan 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: muscat
Version: 1.8.1
Command: rm -rf muscat.buildbin-libdir && mkdir muscat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=muscat.buildbin-libdir muscat_1.8.1.tar.gz
StartedAt: 2022-01-26 06:38:14 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 06:39:24 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 69.8 seconds
RetCode: 0
Status:   OK  
PackageFile: muscat_1.8.1.zip
PackageFileSize: 4.432 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf muscat.buildbin-libdir && mkdir muscat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=muscat.buildbin-libdir muscat_1.8.1.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'muscat' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.4
Current Matrix version is 1.4.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** help
*** installing help indices
  converting help for package 'muscat'
    finding HTML links ... done
    aggregateData                           html  
    calcExprFreqs                           html  
    data                                    html  
    mmDS                                    html  
    pbDS                                    html  
    pbFlatten                               html  
    pbHeatmap                               html  
    finding level-2 HTML links ... done

    pbMDS                                   html  
    prepSCE                                 html  
    prepSim                                 html  
    resDS                                   html  
    simData                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.4
Current Matrix version is 1.4.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** testing if installed package can be loaded from final location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.4
Current Matrix version is 1.4.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'muscat' ...
** testing if installed package can be loaded
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.4
Current Matrix version is 1.4.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
* MD5 sums
packaged installation of 'muscat' as muscat_1.8.1.zip
* DONE (muscat)