Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-24 13:06:34 -0500 (Mon, 24 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for mirIntegrator on tokay2


To the developers/maintainers of the mirIntegrator package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mirIntegrator.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1164/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mirIntegrator 1.24.0  (landing page)
Diana Diaz
Snapshot Date: 2022-01-23 01:55:04 -0500 (Sun, 23 Jan 2022)
git_url: https://git.bioconductor.org/packages/mirIntegrator
git_branch: RELEASE_3_14
git_last_commit: 891cc25
git_last_commit_date: 2021-10-26 12:21:04 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: mirIntegrator
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/mirIntegrator_1.24.0.tar.gz && rm -rf mirIntegrator.buildbin-libdir && mkdir mirIntegrator.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mirIntegrator.buildbin-libdir mirIntegrator_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL mirIntegrator_1.24.0.zip && rm mirIntegrator_1.24.0.tar.gz mirIntegrator_1.24.0.zip
StartedAt: 2022-01-23 04:53:30 -0500 (Sun, 23 Jan 2022)
EndedAt: 2022-01-23 04:54:51 -0500 (Sun, 23 Jan 2022)
EllapsedTime: 80.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/mirIntegrator_1.24.0.tar.gz && rm -rf mirIntegrator.buildbin-libdir && mkdir mirIntegrator.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mirIntegrator.buildbin-libdir mirIntegrator_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL mirIntegrator_1.24.0.zip && rm mirIntegrator_1.24.0.tar.gz mirIntegrator_1.24.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1592k  100 1592k    0     0  3256k      0 --:--:-- --:--:-- --:--:-- 3263k

install for i386

* installing *source* package 'mirIntegrator' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mirIntegrator'
    finding HTML links ... done
    GSE43592_mRNA                           html  
    GSE43592_miRNA                          html  
    augmented_pathways                      html  
    integrate_mir                           html  
    kegg_pathways                           html  
    mirTarBase                              html  
    names_pathways                          html  
    pathways2pdf                            html  
    plot_augmented_pathway                  html  
    plot_change                             html  
    smallest_pathway                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'mirIntegrator' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mirIntegrator' as mirIntegrator_1.24.0.zip
* DONE (mirIntegrator)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'mirIntegrator' successfully unpacked and MD5 sums checked