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This page was generated on 2022-01-26 13:06:47 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for karyoploteR on tokay2


To the developers/maintainers of the karyoploteR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/karyoploteR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 975/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
karyoploteR 1.20.3  (landing page)
Bernat Gel
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/karyoploteR
git_branch: RELEASE_3_14
git_last_commit: 1a34c68
git_last_commit_date: 2022-01-19 05:36:06 -0500 (Wed, 19 Jan 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: karyoploteR
Version: 1.20.3
Command: rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.20.3.tar.gz
StartedAt: 2022-01-26 06:26:06 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 06:27:26 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 80.1 seconds
RetCode: 0
Status:   OK  
PackageFile: karyoploteR_1.20.3.zip
PackageFileSize: 1.285 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.20.3.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'karyoploteR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'karyoploteR'
    finding HTML links ... done
    addGeneNames                            html  
    autotrack                               html  
    colByCategory                           html  
    colByChr                                html  
    colByRegion                             html  
    colByValue                              html  
    darker                                  html  
    filterParams                            html  
    findIntersections                       html  
    getChromosomeNamesBoundingBox           html  
    getColorSchemas                         html  
    getCytobandColors                       html  
    getCytobands                            html  
    finding level-2 HTML links ... done

    getDataPanelBoundingBox                 html  
    getDefaultPlotParams                    html  
    getMainTitleBoundingBox                 html  
    getTextSize                             html  
    getVariantsColors                       html  
    horizonColors                           html  
    is.color                                html  
    kpAbline                                html  
    kpAddBaseNumbers                        html  
    kpAddChromosomeNames                    html  
    kpAddChromosomeSeparators               html  
    kpAddColorRect                          html  
    kpAddCytobandLabels                     html  
    kpAddCytobands                          html  
    kpAddCytobandsAsLine                    html  
    kpAddLabels                             html  
    kpAddMainTitle                          html  
    kpArea                                  html  
    kpArrows                                html  
    kpAxis                                  html  
    kpBars                                  html  
    kpDataBackground                        html  
    kpHeatmap                               html  
    kpLines                                 html  
    kpPlotBAMCoverage                       html  
    kpPlotBAMDensity                        html  
    kpPlotBigWig                            html  
    kpPlotCoverage                          html  
    kpPlotDensity                           html  
    kpPlotGenes                             html  
    kpPlotHorizon                           html  
    kpPlotLinks                             html  
    kpPlotLoess                             html  
    kpPlotManhattan                         html  
    kpPlotMarkers                           html  
    kpPlotNames                             html  
    kpPlotRainfall                          html  
    kpPlotRegions                           html  
    kpPlotRibbon                            html  
    kpPlotTranscripts                       html  
    kpPoints                                html  
    kpPolygon                               html  
    kpRect                                  html  
    kpSegments                              html  
    kpText                                  html  
    lighter                                 html  
    makeGenesDataFromTxDb                   html  
    mergeTranscripts                        html  
    plotDefaultPlotParams                   html  
    plotKaryotype                           html  
    plotPalettes                            html  
    prepareParameters2                      html  
    prepareParameters4                      html  
    processClipping                         html  
    transparent                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'karyoploteR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'karyoploteR' as karyoploteR_1.20.3.zip
* DONE (karyoploteR)