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This page was generated on 2022-01-24 13:06:16 -0500 (Mon, 24 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for gCrisprTools on tokay2


To the developers/maintainers of the gCrisprTools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gCrisprTools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 704/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gCrisprTools 2.0.0  (landing page)
Russell Bainer
Snapshot Date: 2022-01-23 01:55:04 -0500 (Sun, 23 Jan 2022)
git_url: https://git.bioconductor.org/packages/gCrisprTools
git_branch: RELEASE_3_14
git_last_commit: 4783d8f
git_last_commit_date: 2021-10-26 12:29:53 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: gCrisprTools
Version: 2.0.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/gCrisprTools_2.0.0.tar.gz && rm -rf gCrisprTools.buildbin-libdir && mkdir gCrisprTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gCrisprTools.buildbin-libdir gCrisprTools_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL gCrisprTools_2.0.0.zip && rm gCrisprTools_2.0.0.tar.gz gCrisprTools_2.0.0.zip
StartedAt: 2022-01-23 05:18:46 -0500 (Sun, 23 Jan 2022)
EndedAt: 2022-01-23 05:21:01 -0500 (Sun, 23 Jan 2022)
EllapsedTime: 135.4 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/gCrisprTools_2.0.0.tar.gz && rm -rf gCrisprTools.buildbin-libdir && mkdir gCrisprTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gCrisprTools.buildbin-libdir gCrisprTools_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL gCrisprTools_2.0.0.zip && rm gCrisprTools_2.0.0.tar.gz gCrisprTools_2.0.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 12 8196k   12  999k    0     0  1356k      0  0:00:06 --:--:--  0:00:06 1355k
 41 8196k   41 3417k    0     0  1946k      0  0:00:04  0:00:01  0:00:03 1945k
 81 8196k   81 6668k    0     0  2437k      0  0:00:03  0:00:02  0:00:01 2437k
100 8196k  100 8196k    0     0  2638k      0  0:00:03  0:00:03 --:--:-- 2639k

install for i386

* installing *source* package 'gCrisprTools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gCrisprTools'
    finding HTML links ... done
    aln                                     html  
    ann                                     html  
    appendDateAndExt                        html  
    ct.CAT                                  html  
    ct.DirectionalTests                     html  
    ct.GCbias                               html  
    ct.GREATdb                              html  
    ct.PRC                                  html  
    ct.ROC                                  html  
    ct.RRAaPvals                            html  
    ct.RRAalpha                             html  
    ct.RRAalphaBatch                        html  
    ct.alignmentChart                       html  
    ct.alphaBeta                            html  
    ct.applyAlpha                           html  
    ct.buildSE                              html  
    ct.compareContrasts                     html  
    ct.contrastBarchart                     html  
    ct.drawColorLegend                      html  
    ct.drawFlat                             html  
    ct.ecdf                                 html  
    ct.expandAnnotation                     html  
    ct.exprsColor                           html  
    ct.filterReads                          html  
    ct.gRNARankByReplicate                  html  
    ct.generateResults                      html  
    ct.guideCDF                             html  
    ct.inputCheck                           html  
    ct.keyCheck                             html  
    ct.makeContrastReport                   html  
    ct.makeQCReport                         html  
    ct.makeReport                           html  
    ct.makeRhoNull                          html  
    ct.normalizeBySlope                     html  
    ct.normalizeFQ                          html  
    ct.normalizeGuides                      html  
    ct.normalizeMedians                     html  
    ct.normalizeNTC                         html  
    ct.normalizeSpline                      html  
    ct.numcores                             html  
    ct.parseGeneSymbol                      html  
    ct.prepareAnnotation                    html  
    ct.preprocessFit                        html  
    ct.rankSimple                           html  
    ct.rawCountDensities                    html  
    ct.regularizeContrasts                  html  
    ct.resultCheck                          html  
    ct.scatter                              html  
    ct.seas                                 html  
    ct.seasPrep                             html  
    ct.signalSummary                        html  
    ct.simpleResult                         html  
    ct.softLog                              html  
    ct.stackGuides                          html  
    ct.targetSetEnrichment                  html  
    ct.topTargets                           html  
    ct.upSet                                html  
    ct.viewControls                         html  
    ct.viewGuides                           html  
    dir.writable                            html  
    es                                      html  
    essential.genes                         html  
    fit                                     html  
    gCrisprTools-package                    html  
    initOutDir                              html  
    renderReport                            html  
    resultsDF                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gCrisprTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gCrisprTools' as gCrisprTools_2.0.0.zip
* DONE (gCrisprTools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'gCrisprTools' successfully unpacked and MD5 sums checked