Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-17 13:06:07 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for cytomapper on tokay2


To the developers/maintainers of the cytomapper package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cytomapper.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 442/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cytomapper 1.6.0  (landing page)
Nils Eling
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/cytomapper
git_branch: RELEASE_3_14
git_last_commit: 72e006f
git_last_commit_date: 2021-10-26 12:58:24 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: cytomapper
Version: 1.6.0
Command: rm -rf cytomapper.buildbin-libdir && mkdir cytomapper.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cytomapper.buildbin-libdir cytomapper_1.6.0.tar.gz
StartedAt: 2022-01-17 06:53:01 -0500 (Mon, 17 Jan 2022)
EndedAt: 2022-01-17 06:55:26 -0500 (Mon, 17 Jan 2022)
EllapsedTime: 145.3 seconds
RetCode: 0
Status:   OK  
PackageFile: cytomapper_1.6.0.zip
PackageFileSize: 4.973 MiB

Command output

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###
### Running command:
###
###   rm -rf cytomapper.buildbin-libdir && mkdir cytomapper.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cytomapper.buildbin-libdir cytomapper_1.6.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'cytomapper' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: multiple methods tables found for 'direction'
Warning: multiple methods tables found for 'gridDistance'
** help
*** installing help indices
  converting help for package 'cytomapper'
    finding HTML links ... done
    CytoImageList-manipulation              html  
    finding level-2 HTML links ... done

    CytoImageList-naming                    html  
    CytoImageList-subsetting                html  
    CytoImageList                           html  
    cytomapperShiny                         html  
    loadImages                              html  
    measureObjects                          html  
    pancreasImages                          html  
    pancreasMasks                           html  
    pancreasSCE                             html  
    plotCells                               html  
    plotPixels                              html  
    plotting-param                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for 'direction'
Warning: multiple methods tables found for 'gridDistance'
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for 'direction'
Warning: multiple methods tables found for 'gridDistance'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cytomapper' ...
** testing if installed package can be loaded
Warning: multiple methods tables found for 'direction'
Warning: multiple methods tables found for 'gridDistance'
* MD5 sums
packaged installation of 'cytomapper' as cytomapper_1.6.0.zip
* DONE (cytomapper)