Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-21 13:06:10 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for crossmeta on tokay2


To the developers/maintainers of the crossmeta package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/crossmeta.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 420/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
crossmeta 1.20.0  (landing page)
Alex Pickering
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/crossmeta
git_branch: RELEASE_3_14
git_last_commit: 4ebad78
git_last_commit_date: 2021-10-26 12:28:29 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: crossmeta
Version: 1.20.0
Command: rm -rf crossmeta.buildbin-libdir && mkdir crossmeta.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=crossmeta.buildbin-libdir crossmeta_1.20.0.tar.gz
StartedAt: 2022-01-21 05:53:10 -0500 (Fri, 21 Jan 2022)
EndedAt: 2022-01-21 05:53:42 -0500 (Fri, 21 Jan 2022)
EllapsedTime: 31.2 seconds
RetCode: 0
Status:   OK  
PackageFile: crossmeta_1.20.0.zip
PackageFileSize: 2.846 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf crossmeta.buildbin-libdir && mkdir crossmeta.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=crossmeta.buildbin-libdir crossmeta_1.20.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'crossmeta' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'crossmeta'
    finding HTML links ... done
    addContrastInput                        html  
    add_adjusted                            html  
    add_sources                             html  
    add_vsd                                 html  
    bulkAnnot                               html  
    bulkAnnotInput                          html  
    bulkForm                                html  
    bulkFormInput                           html  
    bulkPage                                html  
    bulkPageUI                              html  
    bulkTable                               html  
    bulkTableOuput                          html  
    ch2_subset                              html  
    clean_y                                 html  
    delContrastsInput                       html  
    diff_expr                               html  
    es_meta                                 html  
    exprs.MA                                html  
    filter_genes                            html  
    fit_ebayes                              html  
    fit_lm                                  html  
    fix_illum_headers                       html  
    finding level-2 HTML links ... done

    format_dl_annot                         html  
    format_up_annot                         html  
    get_ch2_mod                             html  
    get_group_levels                        html  
    get_palette                             html  
    get_raw                                 html  
    get_sva_mods                            html  
    get_top_table                           html  
    get_vsd                                 html  
    gs.names                                html  
    gslist                                  html  
    ilmn.nnum                               html  
    iqr_replicates                          html  
    is_invertible                           html  
    load_agil_plat                          html  
    load_diff                               html  
    load_illum_plat                         html  
    load_plat                               html  
    load_raw                                html  
    match_prev_eset                         html  
    open_raw_illum                          html  
    phenoData.ch2                           html  
    prefix_illum_headers                    html  
    query_ref                               html  
    remove_autonamed                        html  
    run_limma                               html  
    run_limma_setup                         html  
    run_lmfit                               html  
    run_select_contrasts                    html  
    run_sva                                 html  
    setup_prev                              html  
    symbol_annot                            html  
    to_eset                                 html  
    to_ma                                   html  
    validate_up_annot                       html  
    which_max_iqr                           html  
    xls_to_txt                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'crossmeta' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'crossmeta' as crossmeta_1.20.0.zip
* DONE (crossmeta)