Back to Multiple platform build/check report for BioC 3.14
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-01-19 13:06:17 -0500 (Wed, 19 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for biomvRCNS on tokay2


To the developers/maintainers of the biomvRCNS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomvRCNS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 186/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomvRCNS 1.34.0  (landing page)
Yang Du
Snapshot Date: 2022-01-18 01:55:07 -0500 (Tue, 18 Jan 2022)
git_url: https://git.bioconductor.org/packages/biomvRCNS
git_branch: RELEASE_3_14
git_last_commit: ce77ae7
git_last_commit_date: 2021-10-26 12:06:49 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: biomvRCNS
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/biomvRCNS_1.34.0.tar.gz && rm -rf biomvRCNS.buildbin-libdir && mkdir biomvRCNS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomvRCNS.buildbin-libdir biomvRCNS_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL biomvRCNS_1.34.0.zip && rm biomvRCNS_1.34.0.tar.gz biomvRCNS_1.34.0.zip
StartedAt: 2022-01-18 07:18:31 -0500 (Tue, 18 Jan 2022)
EndedAt: 2022-01-18 07:20:20 -0500 (Tue, 18 Jan 2022)
EllapsedTime: 109.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/biomvRCNS_1.34.0.tar.gz && rm -rf biomvRCNS.buildbin-libdir && mkdir biomvRCNS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomvRCNS.buildbin-libdir biomvRCNS_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL biomvRCNS_1.34.0.zip && rm biomvRCNS_1.34.0.tar.gz biomvRCNS_1.34.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  115k  100  115k    0     0   867k      0 --:--:-- --:--:-- --:--:--  874k

install for i386

* installing *source* package 'biomvRCNS' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c biomvRCNS.c -o biomvRCNS.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o biomvRCNS.dll tmp.def biomvRCNS.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/biomvRCNS.buildbin-libdir/00LOCK-biomvRCNS/00new/biomvRCNS/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'biomvRCNS'
    finding HTML links ... done
    biomvRCNS-class                         html  
    biomvRGviz                              html  
    biomvRhsmm                              html  
    biomvRmgmr                              html  
    biomvRseg                               html  
    coriell                                 html  
    encodeTP53                              html  
    hsmmRun                                 html  
    maxGapminRun                            html  
    regionSegAlphaNB                        html  
    regionSegCost                           html  
    simSegData                              html  
    sojournAnno                             html  
    splitFarNeighbour                       html  
    variosm                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biomvRCNS' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c biomvRCNS.c -o biomvRCNS.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o biomvRCNS.dll tmp.def biomvRCNS.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/biomvRCNS.buildbin-libdir/biomvRCNS/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biomvRCNS' as biomvRCNS_1.34.0.zip
* DONE (biomvRCNS)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'biomvRCNS' successfully unpacked and MD5 sums checked