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This page was generated on 2021-10-20 12:05:01 -0400 (Wed, 20 Oct 2021).

BUILD BIN results for biomformat on riesling1

To the developers/maintainers of the biomformat package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomformat.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 181/2072HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomformat 1.21.0  (landing page)
Paul J. McMurdie
Snapshot Date: 2021-10-19 14:50:04 -0400 (Tue, 19 Oct 2021)
git_url: https://git.bioconductor.org/packages/biomformat
git_branch: master
git_last_commit: 544a7b9
git_last_commit_date: 2021-05-19 12:16:57 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: biomformat
Version: 1.21.0
Command: rm -rf biomformat.buildbin-libdir && mkdir biomformat.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomformat.buildbin-libdir biomformat_1.21.0.tar.gz
StartedAt: 2021-10-20 05:08:24 -0400 (Wed, 20 Oct 2021)
EndedAt: 2021-10-20 05:12:24 -0400 (Wed, 20 Oct 2021)
EllapsedTime: 239.7 seconds
RetCode: 0
Status:   OK  
PackageFile: biomformat_1.21.0.zip
PackageFileSize: 495.9 KiB

Command output

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###
### Running command:
###
###   rm -rf biomformat.buildbin-libdir && mkdir biomformat.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomformat.buildbin-libdir biomformat_1.21.0.tar.gz
###
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install for i386

* installing *source* package 'biomformat' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'nrow' from package 'base' in package 'biomformat'
Creating a generic function for 'ncol' from package 'base' in package 'biomformat'
Creating a generic function for 'rownames' from package 'base' in package 'biomformat'
Creating a generic function for 'colnames' from package 'base' in package 'biomformat'
** help
*** installing help indices
  converting help for package 'biomformat'
    finding HTML links ... done
    biom-class                              html  
    biom-methods                            html  
    finding level-2 HTML links ... done

    biom-package                            html  
    biom_data-methods                       html  
Rd warning: D:/biocbuild/bbs-3.14-bioc/tmpdir/RtmpIpldTb/R.INSTALL6b0867da6a77/biomformat/man/biom_data-methods.Rd:46: missing link 'plyr-package'
    biom_shape-methods                      html  
    colnames-methods                        html  
    header-methods                          html  
    make_biom                               html  
    matrix_element_type-methods             html  
    ncol-methods                            html  
    nrow-methods                            html  
    observation_metadata-methods            html  
Rd warning: D:/biocbuild/bbs-3.14-bioc/tmpdir/RtmpIpldTb/R.INSTALL6b0867da6a77/biomformat/man/observation_metadata-methods.Rd:30: missing link 'plyr-package'
    read_biom                               html  
    read_hdf5_biom                          html  
    rownames-methods                        html  
    sample_metadata-methods                 html  
Rd warning: D:/biocbuild/bbs-3.14-bioc/tmpdir/RtmpIpldTb/R.INSTALL6b0867da6a77/biomformat/man/sample_metadata-methods.Rd:30: missing link 'plyr-package'
    show-methods                            html  
    write_biom                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biomformat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biomformat' as biomformat_1.21.0.zip
* DONE (biomformat)