Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-21 13:06:00 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for biobroom on tokay2


To the developers/maintainers of the biobroom package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biobroom.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 153/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biobroom 1.26.0  (landing page)
John D. Storey and Andrew J. Bass
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/biobroom
git_branch: RELEASE_3_14
git_last_commit: ca6f1c4
git_last_commit_date: 2021-10-26 12:23:36 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: biobroom
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/biobroom_1.26.0.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL biobroom_1.26.0.zip && rm biobroom_1.26.0.tar.gz biobroom_1.26.0.zip
StartedAt: 2022-01-20 05:50:28 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 05:51:20 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 51.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/biobroom_1.26.0.tar.gz && rm -rf biobroom.buildbin-libdir && mkdir biobroom.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biobroom.buildbin-libdir biobroom_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL biobroom_1.26.0.zip && rm biobroom_1.26.0.tar.gz biobroom_1.26.0.zip
###
##############################################################################
##############################################################################


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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  218k  100  218k    0     0   786k      0 --:--:-- --:--:-- --:--:--  787k
100  218k  100  218k    0     0   785k      0 --:--:-- --:--:-- --:--:--  784k

install for i386

* installing *source* package 'biobroom' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'biobroom'
    finding HTML links ... done
    DESeq2_tidiers                          html  
    ExpressionSet_tidiers                   html  
    GRanges_tidiers                         html  
    MSnSet_tidiers                          html  
    SummarizedExperiment_tidiers            html  
    biobroom                                html  
    edgeR_tidiers                           html  
    edge_tidiers                            html  
    hammer                                  html  
    limma_tidiers                           html  
    list_tidiers                            html  
    qvalue_tidiers                          html  
    sva_tidiers                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biobroom' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biobroom' as biobroom_1.26.0.zip
* DONE (biobroom)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'biobroom' successfully unpacked and MD5 sums checked