Back to Multiple platform build/check report for BioC 3.14
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-20 12:05:01 -0400 (Wed, 20 Oct 2021).

INSTALL results for bioassayR on riesling1

To the developers/maintainers of the bioassayR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bioassayR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 151/2072HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bioassayR 1.31.0  (landing page)
Daniela Cassol
Snapshot Date: 2021-10-19 14:50:04 -0400 (Tue, 19 Oct 2021)
git_url: https://git.bioconductor.org/packages/bioassayR
git_branch: master
git_last_commit: 9dde062
git_last_commit_date: 2021-05-19 12:01:01 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: bioassayR
Version: 1.31.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/bioassayR_1.31.0.tar.gz && rm -rf bioassayR.buildbin-libdir && mkdir bioassayR.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bioassayR.buildbin-libdir bioassayR_1.31.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL bioassayR_1.31.0.zip && rm bioassayR_1.31.0.tar.gz bioassayR_1.31.0.zip
StartedAt: 2021-10-19 17:21:05 -0400 (Tue, 19 Oct 2021)
EndedAt: 2021-10-19 17:25:03 -0400 (Tue, 19 Oct 2021)
EllapsedTime: 237.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/bioassayR_1.31.0.tar.gz && rm -rf bioassayR.buildbin-libdir && mkdir bioassayR.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bioassayR.buildbin-libdir bioassayR_1.31.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL bioassayR_1.31.0.zip && rm bioassayR_1.31.0.tar.gz bioassayR_1.31.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  305k  100  305k    0     0  1328k      0 --:--:-- --:--:-- --:--:-- 1328k

install for i386

* installing *source* package 'bioassayR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'organism' in package 'bioassayR'
Creating a new generic function for 'organism<-' in package 'bioassayR'
** help
*** installing help indices
  converting help for package 'bioassayR'
    finding HTML links ... done
    BioAssayDB-class                        html  
    activeAgainst                           html  
    activeTargets                           html  
    addBioassayIndex                        html  
    addDataSource                           html  
    allCids                                 html  
    allTargets                              html  
    assaySetTargets                         html  
    bioactivityFingerprint                  html  
    bioassay-class                          html  
    bioassaySet-class                       html  
    connectBioassayDB                       html  
    crossReactivityProbability              html  
    disconnectBioassayDB                    html  
    dropBioassay                            html  
    dropBioassayIndex                       html  
    getAssay                                html  
    getAssays                               html  
    getBioassaySetByCids                    html  
    inactiveTargets                         html  
    loadBioassay                            html  
    loadIdMapping                           html  
    newBioassayDB                           html  
    parsePubChemBioassay                    html  
    perTargetMatrix                         html  
    queryBioassayDB                         html  
    samplebioassay                          html  
    scaleBioassaySet                        html  
    screenedAtLeast                         html  
    selectiveAgainst                        html  
    targetSelectivity                       html  
    translateTargetId                       html  
    trinarySimilarity                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'bioassayR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bioassayR' as bioassayR_1.31.0.zip
* DONE (bioassayR)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'bioassayR' successfully unpacked and MD5 sums checked