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This page was generated on 2021-10-23 14:06:18 -0400 (Sat, 23 Oct 2021).

INSTALL results for annotatr on riesling1

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raw results

Package 66/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
annotatr 1.19.2  (landing page)
Raymond G. Cavalcante
Snapshot Date: 2021-10-22 14:50:11 -0400 (Fri, 22 Oct 2021)
git_url: https://git.bioconductor.org/packages/annotatr
git_branch: master
git_last_commit: 9e33501
git_last_commit_date: 2021-10-21 14:58:34 -0400 (Thu, 21 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  YES
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  YES
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  YES

Summary

Package: annotatr
Version: 1.19.2
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/annotatr_1.19.2.tar.gz && rm -rf annotatr.buildbin-libdir && mkdir annotatr.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotatr.buildbin-libdir annotatr_1.19.2.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL annotatr_1.19.2.zip && rm annotatr_1.19.2.tar.gz annotatr_1.19.2.zip
StartedAt: 2021-10-22 19:00:04 -0400 (Fri, 22 Oct 2021)
EndedAt: 2021-10-22 19:02:48 -0400 (Fri, 22 Oct 2021)
EllapsedTime: 163.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/annotatr_1.19.2.tar.gz && rm -rf annotatr.buildbin-libdir && mkdir annotatr.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotatr.buildbin-libdir annotatr_1.19.2.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL annotatr_1.19.2.zip && rm annotatr_1.19.2.tar.gz annotatr_1.19.2.zip
###
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install for i386

* installing *source* package 'annotatr' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'annotatr'
    finding HTML links ... done
    annotate_regions                        html  
    annotations                             html  
    annotatr                                html  
    annotatr_cache                          html  
    build_ah_annots                         html  
    build_annotations                       html  
    build_cpg_annots                        html  
    build_enhancer_annots                   html  
    build_gene_annots                       html  
    build_hmm_annots                        html  
    build_lncrna_annots                     html  
    builtin_annotations                     html  
    builtin_genomes                         html  
    check_annotations                       html  
    expand_annotations                      html  
    get_cellline_from_code                  html  
    get_cellline_from_shortcut              html  
    get_orgdb_name                          html  
    get_txdb_name                           html  
    plot_annotation                         html  
    plot_categorical                        html  
    plot_coannotations                      html  
    plot_numerical                          html  
    plot_numerical_coannotations            html  
    randomize_regions                       html  
    read_annotations                        html  
    read_regions                            html  
    reformat_hmm_codes                      html  
    subset_order_tbl                        html  
    summarize_annotations                   html  
    summarize_categorical                   html  
    summarize_numerical                     html  
    tidy_annotations                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'annotatr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'annotatr' as annotatr_1.19.2.zip
* DONE (annotatr)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'annotatr' successfully unpacked and MD5 sums checked