Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-26 13:06:10 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for aggregateBioVar on tokay2


To the developers/maintainers of the aggregateBioVar package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/aggregateBioVar.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 35/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
aggregateBioVar 1.4.0  (landing page)
Jason Ratcliff
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/aggregateBioVar
git_branch: RELEASE_3_14
git_last_commit: 0964b9a
git_last_commit_date: 2021-10-26 13:03:14 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: aggregateBioVar
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/aggregateBioVar_1.4.0.tar.gz && rm -rf aggregateBioVar.buildbin-libdir && mkdir aggregateBioVar.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=aggregateBioVar.buildbin-libdir aggregateBioVar_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL aggregateBioVar_1.4.0.zip && rm aggregateBioVar_1.4.0.tar.gz aggregateBioVar_1.4.0.zip
StartedAt: 2022-01-25 05:34:31 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 05:35:25 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 53.8 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/aggregateBioVar_1.4.0.tar.gz && rm -rf aggregateBioVar.buildbin-libdir && mkdir aggregateBioVar.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=aggregateBioVar.buildbin-libdir aggregateBioVar_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL aggregateBioVar_1.4.0.zip && rm aggregateBioVar_1.4.0.tar.gz aggregateBioVar_1.4.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 21 3131k   21  667k    0     0  1439k      0  0:00:02 --:--:--  0:00:02 1440k
100 3131k  100 3131k    0     0  2704k      0  0:00:01  0:00:01 --:--:-- 2706k

install for i386

* installing *source* package 'aggregateBioVar' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'aggregateBioVar'
    finding HTML links ... done
    aggregateBioVar                         html  
    finding level-2 HTML links ... done

    countsByCell                            html  
    countsBySubject                         html  
    scSubjects                              html  
    small_airway                            html  
    subjectMetaData                         html  
    summarizedCounts                        html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'aggregateBioVar' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'aggregateBioVar' as aggregateBioVar_1.4.0.zip
* DONE (aggregateBioVar)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'aggregateBioVar' successfully unpacked and MD5 sums checked