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This page was generated on 2022-04-13 12:07:24 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for SplicingGraphs on tokay2


To the developers/maintainers of the SplicingGraphs package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SplicingGraphs.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1863/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SplicingGraphs 1.34.0  (landing page)
H. Pag├Ęs
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/SplicingGraphs
git_branch: RELEASE_3_14
git_last_commit: 25cc726
git_last_commit_date: 2021-10-26 12:08:01 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: SplicingGraphs
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SplicingGraphs_1.34.0.tar.gz && rm -rf SplicingGraphs.buildbin-libdir && mkdir SplicingGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SplicingGraphs.buildbin-libdir SplicingGraphs_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SplicingGraphs_1.34.0.zip && rm SplicingGraphs_1.34.0.tar.gz SplicingGraphs_1.34.0.zip
StartedAt: 2022-04-12 07:00:50 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:02:40 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 110.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SplicingGraphs_1.34.0.tar.gz && rm -rf SplicingGraphs.buildbin-libdir && mkdir SplicingGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SplicingGraphs.buildbin-libdir SplicingGraphs_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SplicingGraphs_1.34.0.zip && rm SplicingGraphs_1.34.0.tar.gz SplicingGraphs_1.34.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1 45.5M    1  728k    0     0   928k      0  0:00:50 --:--:--  0:00:50  928k
  5 45.5M    5 2531k    0     0  1420k      0  0:00:32  0:00:01  0:00:31 1420k
 11 45.5M   11 5273k    0     0  1892k      0  0:00:24  0:00:02  0:00:22 1892k
 18 45.5M   18 8780k    0     0  2331k      0  0:00:20  0:00:03  0:00:17 2331k
 28 45.5M   28 13.0M    0     0  2791k      0  0:00:16  0:00:04  0:00:12 2791k
 40 45.5M   40 18.3M    0     0  3257k      0  0:00:14  0:00:05  0:00:09 3623k
 54 45.5M   54 24.7M    0     0  3718k      0  0:00:12  0:00:06  0:00:06 4532k
 62 45.5M   62 28.3M    0     0  3744k      0  0:00:12  0:00:07  0:00:05 4780k
 72 45.5M   72 33.0M    0     0  3859k      0  0:00:12  0:00:08  0:00:04 5010k
 84 45.5M   84 38.5M    0     0  4043k      0  0:00:11  0:00:09  0:00:02 5243k
 92 45.5M   92 42.2M    0     0  4024k      0  0:00:11  0:00:10  0:00:01 4913k
 99 45.5M   99 45.3M    0     0  3948k      0  0:00:11  0:00:11 --:--:-- 4266k
100 45.5M  100 45.5M    0     0  3934k      0  0:00:11  0:00:11 --:--:-- 4295k

install for i386

* installing *source* package 'SplicingGraphs' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs'
Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs'
** help
*** installing help indices
  converting help for package 'SplicingGraphs'
    finding HTML links ... done
    SplicingGraphs-class                    html  
    SplicingGraphs-package                  html  
    TSPCsg                                  html  
    assignReads                             html  
    bubbles-methods                         html  
    countReads-methods                      html  
    plotTranscripts-methods                 html  
    rsgedgesByGene-methods                  html  
    sgedges-methods                         html  
    sgedgesByGene-methods                   html  
    sgraph-methods                          html  
    toy_data                                html  
    txpath-methods                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs'
Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs'
Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SplicingGraphs' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs'
Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs'
* MD5 sums
packaged installation of 'SplicingGraphs' as SplicingGraphs_1.34.0.zip
* DONE (SplicingGraphs)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SplicingGraphs' successfully unpacked and MD5 sums checked