Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-14 13:07:07 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for SBGNview on tokay2


To the developers/maintainers of the SBGNview package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SBGNview.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1697/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SBGNview 1.8.0  (landing page)
Weijun Luo
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/SBGNview
git_branch: RELEASE_3_14
git_last_commit: 1a402c7
git_last_commit_date: 2021-10-26 12:52:48 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SBGNview
Version: 1.8.0
Command: rm -rf SBGNview.buildbin-libdir && mkdir SBGNview.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.buildbin-libdir SBGNview_1.8.0.tar.gz
StartedAt: 2022-01-14 06:33:41 -0500 (Fri, 14 Jan 2022)
EndedAt: 2022-01-14 06:34:42 -0500 (Fri, 14 Jan 2022)
EllapsedTime: 61.2 seconds
RetCode: 0
Status:   OK  
PackageFile: SBGNview_1.8.0.zip
PackageFileSize: 2.075 MiB

Command output

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###
### Running command:
###
###   rm -rf SBGNview.buildbin-libdir && mkdir SBGNview.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.buildbin-libdir SBGNview_1.8.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'SBGNview' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SBGNview'
    finding HTML links ... done
    SBGNhub.id.mapping.tables               html  
    SBGNview                                html  
    arc-class                               html  
    changeDataId                            html  
    changeIds                               html  
    downloadSbgnFile                        html  
    findPathways                            html  
    glyph-class                             html  
    highlightArcs                           html  
    highlightNodes                          html  
    highlightPath                           html  
    loadMappingTable                        html  
    mapped.ids                              html  
    outputFile-set                          html  
    outputFile                              html  
    pathways.info                           html  
    pathways.stats                          html  
    plus-.SBGNview                          html  
    print.SBGNview                          html  
    renderSbgn                              html  
    sbgn.gsets                              html  
    sbgnNodes                               html  
    spline.arc-class                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SBGNview' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SBGNview' as SBGNview_1.8.0.zip
* DONE (SBGNview)