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This page was generated on 2022-01-26 13:07:00 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for NanoStringQCPro on tokay2


To the developers/maintainers of the NanoStringQCPro package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/NanoStringQCPro.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1267/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NanoStringQCPro 1.26.0  (landing page)
Robert Ziman
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/NanoStringQCPro
git_branch: RELEASE_3_14
git_last_commit: 42d2b8e
git_last_commit_date: 2021-10-26 12:20:01 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: NanoStringQCPro
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/NanoStringQCPro_1.26.0.tar.gz && rm -rf NanoStringQCPro.buildbin-libdir && mkdir NanoStringQCPro.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoStringQCPro.buildbin-libdir NanoStringQCPro_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL NanoStringQCPro_1.26.0.zip && rm NanoStringQCPro_1.26.0.tar.gz NanoStringQCPro_1.26.0.zip
StartedAt: 2022-01-25 05:14:09 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 05:16:15 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 126.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/NanoStringQCPro_1.26.0.tar.gz && rm -rf NanoStringQCPro.buildbin-libdir && mkdir NanoStringQCPro.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoStringQCPro.buildbin-libdir NanoStringQCPro_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL NanoStringQCPro_1.26.0.zip && rm NanoStringQCPro_1.26.0.tar.gz NanoStringQCPro_1.26.0.zip
###
##############################################################################
##############################################################################


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100  245k  100  245k    0     0   906k      0 --:--:-- --:--:-- --:--:--  907k

install for i386

* installing *source* package 'NanoStringQCPro' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NanoStringQCPro'
    finding HTML links ... done
    NanoStringQCPro                         html  
    RccSet-class                            html  
    finding level-2 HTML links ... done

    RccSet                                  html  
    addCodesetAnnotation                    html  
    addQCFlags                              html  
    allSumPlot                              html  
    assessHousekeeping                      html  
    bdPlot                                  html  
    buildCodesetAnnotation                  html  
    checkRccSet                             html  
    colByCovar                              html  
    colByFun                                html  
    contentNorm                             html  
    copyRccSet                              html  
    countsInBlankSamples_verticalPlot       html  
    ctrlsOverviewPlot                       html  
    ctrlsZprimePlot                         html  
    cutoffByMMAD                            html  
    cutoffByVar                             html  
    dCoVar                                  html  
    densityPlot                             html  
    example_rccSet                          html  
    flagSamplesCount                        html  
    flagSamplesCtrl                         html  
    flagSamplesTech                         html  
    fovPlot                                 html  
    geneClustering                          html  
    getBackground                           html  
    getBlankLabel                           html  
    getSpikeInInput                         html  
    iqrPlot                                 html  
    lodAssess                               html  
    lodPlot                                 html  
    makeQCReport                            html  
    myCols                                  html  
    nSolverBackground                       html  
    nSolverCsv.to.pdata_fdata_adata         html  
    negCtrlsByLane                          html  
    negCtrlsByLane_verticalPlot             html  
    negCtrlsPairs                           html  
    negCtrlsPlot                            html  
    newRccSet                               html  
    panelCor                                html  
    pcaPlot                                 html  
    pdata_fdata_adata.to.rccSet             html  
    posCtrlNorm                             html  
    posNormFactPlot                         html  
    posR2Plot                               html  
    posRatioPlot                            html  
    posSlopePlot                            html  
    posSumVsAllSumPlot                      html  
    preprocRccSet                           html  
    presAbsCall                             html  
    previewPNG                              html  
    rccFiles.to.pdata_fdata_adata           html  
    readCdrDesignData                       html  
    readRcc                                 html  
    readRccBatch                            html  
    readRccCollectorToolExport              html  
    readRlf                                 html  
    sampleClustering                        html  
    scatterPair                             html  
    subtractBackground                      html  
    zfacFun                                 html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'NanoStringQCPro' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NanoStringQCPro' as NanoStringQCPro_1.26.0.zip
* DONE (NanoStringQCPro)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'NanoStringQCPro' successfully unpacked and MD5 sums checked