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This page was generated on 2022-01-21 13:06:33 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for KEGGlincs on tokay2


To the developers/maintainers of the KEGGlincs package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/KEGGlincs.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 980/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
KEGGlincs 1.20.0  (landing page)
Shana White , Mario Medvedovic
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/KEGGlincs
git_branch: RELEASE_3_14
git_last_commit: 65205d4
git_last_commit_date: 2021-10-26 12:30:32 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: KEGGlincs
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KEGGlincs_1.20.0.tar.gz && rm -rf KEGGlincs.buildbin-libdir && mkdir KEGGlincs.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KEGGlincs.buildbin-libdir KEGGlincs_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KEGGlincs_1.20.0.zip && rm KEGGlincs_1.20.0.tar.gz KEGGlincs_1.20.0.zip
StartedAt: 2022-01-20 04:44:40 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 04:45:33 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 53.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KEGGlincs_1.20.0.tar.gz && rm -rf KEGGlincs.buildbin-libdir && mkdir KEGGlincs.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KEGGlincs.buildbin-libdir KEGGlincs_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KEGGlincs_1.20.0.zip && rm KEGGlincs_1.20.0.tar.gz KEGGlincs_1.20.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2149k  100 2149k    0     0  2348k      0 --:--:-- --:--:-- --:--:-- 2351k

install for i386

* installing *source* package 'KEGGlincs' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'KEGGlincs'
    finding HTML links ... done
    KEGG_lincs                              html  
    KEGGlincs                               html  
    KL_compare                              html  
    add_edge_data                           html  
    cyto_vis                                html  
    edge_mapping_info                       html  
    expand_KEGG_edges                       html  
    expand_KEGG_mappings                    html  
    generate_mappings                       html  
    get_KGML                                html  
    get_fisher_info                         html  
    get_graph_object                        html  
    keggerize_edges                         html  
    node_mapping_info                       html  
    overlap_info                            html  
    path_genes_by_cell_type                 html  
    refine_mappings                         html  
    tidy_edge                               html  
    toCytoscape                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'KEGGlincs' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'KEGGlincs' as KEGGlincs_1.20.0.zip
* DONE (KEGGlincs)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'KEGGlincs' successfully unpacked and MD5 sums checked