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This page was generated on 2022-01-17 13:06:21 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for GmicR on tokay2


To the developers/maintainers of the GmicR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GmicR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 794/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GmicR 1.8.0  (landing page)
Richard Virgen-Slane
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/GmicR
git_branch: RELEASE_3_14
git_last_commit: f795e9d
git_last_commit_date: 2021-10-26 12:54:44 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: GmicR
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GmicR_1.8.0.tar.gz && rm -rf GmicR.buildbin-libdir && mkdir GmicR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GmicR.buildbin-libdir GmicR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GmicR_1.8.0.zip && rm GmicR_1.8.0.tar.gz GmicR_1.8.0.zip
StartedAt: 2022-01-16 06:00:43 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 06:01:56 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 72.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GmicR_1.8.0.tar.gz && rm -rf GmicR.buildbin-libdir && mkdir GmicR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GmicR.buildbin-libdir GmicR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GmicR_1.8.0.zip && rm GmicR_1.8.0.tar.gz GmicR_1.8.0.zip
###
##############################################################################
##############################################################################


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100 3576k  100 3576k    0     0  5088k      0 --:--:-- --:--:-- --:--:-- 5095k

install for i386

* installing *source* package 'GmicR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
** help
*** installing help indices
  converting help for package 'GmicR'
    finding HTML links ... done
    Auto_WGCNA                              html  
    Batch_Net                               html  
    Data_Prep                               html  
    GO_Module_NameR                         html  
    GSEAGO_Builder                          html  
    Gmic_viz                                html  
    InverseARCs                             html  
    Query_Prep                              html  
    bn_tabu_gen                             html  
    xCell_loader                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GmicR' ...
not using staged install with --libs-only
** testing if installed package can be loaded
Warning: replacing previous import 'ape::degree' by 'bnlearn::degree' when loading 'GmicR'
* MD5 sums
packaged installation of 'GmicR' as GmicR_1.8.0.zip
* DONE (GmicR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GmicR' successfully unpacked and MD5 sums checked