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This page was generated on 2022-01-21 13:06:24 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4079
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4140
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for GenomicSuperSignature on tokay2


To the developers/maintainers of the GenomicSuperSignature package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GenomicSuperSignature.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 758/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicSuperSignature 1.2.1  (landing page)
Sehyun Oh
Snapshot Date: 2022-01-20 01:55:04 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/GenomicSuperSignature
git_branch: RELEASE_3_14
git_last_commit: e88625b
git_last_commit_date: 2021-12-15 23:43:22 -0500 (Wed, 15 Dec 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: GenomicSuperSignature
Version: 1.2.1
Command: rm -rf GenomicSuperSignature.buildbin-libdir && mkdir GenomicSuperSignature.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicSuperSignature.buildbin-libdir GenomicSuperSignature_1.2.1.tar.gz
StartedAt: 2022-01-21 06:15:09 -0500 (Fri, 21 Jan 2022)
EndedAt: 2022-01-21 06:15:59 -0500 (Fri, 21 Jan 2022)
EllapsedTime: 50.1 seconds
RetCode: 0
Status:   OK  
PackageFile: GenomicSuperSignature_1.2.1.zip
PackageFileSize: 6.418 MiB

Command output

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###
### Running command:
###
###   rm -rf GenomicSuperSignature.buildbin-libdir && mkdir GenomicSuperSignature.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicSuperSignature.buildbin-libdir GenomicSuperSignature_1.2.1.tar.gz
###
##############################################################################
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install for i386

* installing *source* package 'GenomicSuperSignature' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GenomicSuperSignature'
    finding HTML links ... done
    GenomicSignatures-class                 html  
    GenomicSignatures-methods               html  
    PCAGenomicSignatures-class              html  
    PCAGenomicSignatures-methods            html  
    PCAGenomicSignatures                    html  
    PCinRAV                                 html  
    annotatePC                              html  
    annotateRAV                             html  
    buildAvgLoading                         html  
    calculateScore                          html  
    dot-RAVName                             html  
    dot-calculateSilhouetteWidth            html  
    dot-loadingCor                          html  
    drawWordcloud                           html  
    droplist                                html  
    extractPC                               html  
    findKeywordInRAV                        html  
    findSignature                           html  
    findStudiesInCluster                    html  
    getModel                                html  
    heatmapTable                            html  
    makeGeneList                            html  
    meshTable                               html  
    miniAllZ                                html  
    miniRAVmodel                            html  
    miniTCGA                                html  
    msigdb_gsea                             html  
    plotAnnotatedPCA                        html  
    plotValidate                            html  
    res_hcut                                html  
    rmNaInf                                 html  
    rowNorm                                 html  
    run_gsea                                html  
    sampleScoreHeatmap                      html  
    subsetEnrichedPathways                  html  
    subsetGSEA                              html  
    validate                                html  
    validatedSignatures                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GenomicSuperSignature' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomicSuperSignature' as GenomicSuperSignature_1.2.1.zip
* DONE (GenomicSuperSignature)