Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2021-10-21 12:04:39 -0400 (Thu, 21 Oct 2021).

CHECK results for BiocVersion on riesling1

To the developers/maintainers of the BiocVersion package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiocVersion.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 172/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocVersion 3.14.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-10-20 14:50:05 -0400 (Wed, 20 Oct 2021)
git_url: https://git.bioconductor.org/packages/BiocVersion
git_branch: master
git_last_commit: aa56d93
git_last_commit_date: 2021-05-19 12:35:54 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: BiocVersion
Version: 3.14.0
Command: D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:BiocVersion.install-out.txt --library=D:\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings BiocVersion_3.14.0.tar.gz
StartedAt: 2021-10-21 00:36:40 -0400 (Thu, 21 Oct 2021)
EndedAt: 2021-10-21 00:39:17 -0400 (Thu, 21 Oct 2021)
EllapsedTime: 156.6 seconds
RetCode: 0
Status:   OK  
CheckDir: BiocVersion.Rcheck
Warnings: 0

Command output

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###
### Running command:
###
###   D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:BiocVersion.install-out.txt --library=D:\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings BiocVersion_3.14.0.tar.gz
###
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* using log directory 'D:/biocbuild/bbs-3.14-bioc/meat/BiocVersion.Rcheck'
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'BiocVersion/DESCRIPTION' ... OK
* this is package 'BiocVersion' version '3.14.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'BiocVersion' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
* DONE

Status: OK


Installation output

BiocVersion.Rcheck/00install.out

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BiocVersion_3.14.0.tar.gz && rm -rf BiocVersion.buildbin-libdir && mkdir BiocVersion.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocVersion.buildbin-libdir BiocVersion_3.14.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BiocVersion_3.14.0.zip && rm BiocVersion_3.14.0.tar.gz BiocVersion_3.14.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   750  100   750    0     0   9375      0 --:--:-- --:--:-- --:--:--  9375

install for i386

* installing *source* package 'BiocVersion' ...
** using staged installation
** help
*** installing help indices
  converting help for package 'BiocVersion'
    finding HTML links ... done
    BiocVersion-pkg                         html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BiocVersion' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocVersion' as BiocVersion_3.14.0.zip
* DONE (BiocVersion)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'BiocVersion' successfully unpacked and MD5 sums checked

Tests output


Example timings

BiocVersion.Rcheck/examples_i386/BiocVersion-Ex.timings

nameusersystemelapsed
BiocVersion-pkg000

BiocVersion.Rcheck/examples_x64/BiocVersion-Ex.timings

nameusersystemelapsed
BiocVersion-pkg0.010.000.01