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This page was generated on 2021-10-26 14:06:54 -0400 (Tue, 26 Oct 2021).

INSTALL results for BioNERO on riesling1

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BioNERO.git to
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raw results

Package 187/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioNERO 1.1.7  (landing page)
Fabricio Almeida-Silva
Snapshot Date: 2021-10-25 14:50:11 -0400 (Mon, 25 Oct 2021)
git_url: https://git.bioconductor.org/packages/BioNERO
git_branch: master
git_last_commit: 2d7b1c1
git_last_commit_date: 2021-10-20 21:30:07 -0400 (Wed, 20 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  

Summary

Package: BioNERO
Version: 1.1.7
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BioNERO_1.1.7.tar.gz && rm -rf BioNERO.buildbin-libdir && mkdir BioNERO.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioNERO.buildbin-libdir BioNERO_1.1.7.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BioNERO_1.1.7.zip && rm BioNERO_1.1.7.tar.gz BioNERO_1.1.7.zip
StartedAt: 2021-10-25 18:55:16 -0400 (Mon, 25 Oct 2021)
EndedAt: 2021-10-25 18:58:12 -0400 (Mon, 25 Oct 2021)
EllapsedTime: 175.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BioNERO_1.1.7.tar.gz && rm -rf BioNERO.buildbin-libdir && mkdir BioNERO.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioNERO.buildbin-libdir BioNERO_1.1.7.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BioNERO_1.1.7.zip && rm BioNERO_1.1.7.tar.gz BioNERO_1.1.7.zip
###
##############################################################################
##############################################################################


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100 2496k  100 2496k    0     0  3364k      0 --:--:-- --:--:-- --:--:-- 3364k

install for i386

* installing *source* package 'BioNERO' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BioNERO'
    finding HTML links ... done
    PC_correction                           html  
    SFT_fit                                 html  
    ZKfiltering                             html  
    check_SFT                               html  
    consensus_SFT_fit                       html  
    consensus_modules                       html  
    consensus_trait_cor                     html  
    cormat_to_edgelist                      html  
    detect_communities                      html  
    dfs2one                                 html  
    enrichment_analysis                     html  
    exp2gcn                                 html  
    exp2grn                                 html  
    exp_genes2orthogroups                   html  
    exp_preprocess                          html  
    filt.se                                 html  
    filter_by_variance                      html  
    gene_significance                       html  
    get_HK                                  html  
    get_edge_list                           html  
    get_hubs_gcn                            html  
    get_hubs_grn                            html  
    get_neighbors                           html  
    grn_average_rank                        html  
    grn_combined                            html  
    grn_filter                              html  
    grn_infer                               html  
    is_singleton                            html  
    modPres_WGCNA                           html  
    modPres_netrep                          html  
    module_enrichment                       html  
    module_preservation                     html  
    module_stability                        html  
    module_trait_cor                        html  
    net_stats                               html  
    og.zma.osa                              html  
    osa.se                                  html  
    parse_orthofinder                       html  
    plot_PCA                                html  
    plot_dendro_and_colors                  html  
    plot_dendro_and_cons_colors             html  
    plot_eigengene_network                  html  
    plot_expression_profile                 html  
    plot_gcn                                html  
    plot_grn                                html  
    plot_heatmap                            html  
    plot_ngenes_per_module                  html  
    plot_ppi                                html  
    q_normalize                             html  
    remove_nonexp                           html  
    replace_na                              html  
    zma.interpro                            html  
    zma.se                                  html  
    zma.tfs                                 html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BioNERO' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioNERO' as BioNERO_1.1.7.zip
* DONE (BioNERO)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'BioNERO' successfully unpacked and MD5 sums checked