Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-17 13:05:58 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for BioMM on tokay2


To the developers/maintainers of the BioMM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BioMM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 184/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioMM 1.10.0  (landing page)
Junfang Chen
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/BioMM
git_branch: RELEASE_3_14
git_last_commit: 861a791
git_last_commit_date: 2021-10-26 12:49:29 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: BioMM
Version: 1.10.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BioMM_1.10.0.tar.gz && rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioMM.buildbin-libdir BioMM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BioMM_1.10.0.zip && rm BioMM_1.10.0.tar.gz BioMM_1.10.0.zip
StartedAt: 2022-01-16 06:58:22 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 06:59:54 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 92.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BioMM_1.10.0.tar.gz && rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioMM.buildbin-libdir BioMM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BioMM_1.10.0.zip && rm BioMM_1.10.0.tar.gz BioMM_1.10.0.zip
###
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100 2548k  100 2548k    0     0  5448k      0 --:--:-- --:--:-- --:--:-- 5457k

install for i386

* installing *source* package 'BioMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BioMM'
    finding HTML links ... done
    BioMM                                   html  
    BioMMstage2pred                         html  
    baseGLMnet                              html  
    baseModel                               html  
    baseRandForest                          html  
    baseSVM                                 html  
    cirPlot4pathway                         html  
    classifiACC                             html  
    getDataByFilter                         html  
    getMetrics                              html  
    omics2pathlist                          html  
    plotRankedFeature                       html  
    plotVarExplained                        html  
    predByBS                                html  
    predByCV                                html  
    predByFS                                html  
    reconBySupervised                       html  
    reconByUnsupervised                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BioMM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioMM' as BioMM_1.10.0.zip
* DONE (BioMM)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'BioMM' successfully unpacked and MD5 sums checked