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This page was generated on 2021-10-23 14:06:19 -0400 (Sat, 23 Oct 2021).

BUILD BIN results for BEclear on riesling1

To the developers/maintainers of the BEclear package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BEclear.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 138/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEclear 2.9.2  (landing page)
David Rasp
Snapshot Date: 2021-10-22 14:50:11 -0400 (Fri, 22 Oct 2021)
git_url: https://git.bioconductor.org/packages/BEclear
git_branch: master
git_last_commit: d3ce372
git_last_commit_date: 2021-10-07 13:22:07 -0400 (Thu, 07 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: BEclear
Version: 2.9.2
Command: rm -rf BEclear.buildbin-libdir && mkdir BEclear.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BEclear.buildbin-libdir BEclear_2.9.2.tar.gz
StartedAt: 2021-10-23 09:44:37 -0400 (Sat, 23 Oct 2021)
EndedAt: 2021-10-23 09:48:42 -0400 (Sat, 23 Oct 2021)
EllapsedTime: 245.0 seconds
RetCode: 0
Status:   OK  
PackageFile: BEclear_2.9.2.zip
PackageFileSize: 1.311 MiB

Command output

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### Running command:
###
###   rm -rf BEclear.buildbin-libdir && mkdir BEclear.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BEclear.buildbin-libdir BEclear_2.9.2.tar.gz
###
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install for i386

* installing *source* package 'BEclear' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c localLoss.cpp -o localLoss.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o BEclear.dll tmp.def RcppExports.o localLoss.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.14-bioc/R/bin/i386 -lR
installing to D:/biocbuild/bbs-3.14-bioc/meat/BEclear.buildbin-libdir/00LOCK-BEclear/00new/BEclear/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BEclear'
    finding HTML links ... done
    BEclear-example-methylation-data        html  
    BEclear-example-sample-data             html  
    BEclear-package                         html  
    calcBatchEffects                        html  
    calcBatchEffectsForBatch                html  
    calcBlockFrame                          html  
    calcPositions                           html  
    calcScore                               html  
    calcSummary                             html  
    clearBEgenes                            html  
    combineBlocks                           html  
    correctBatchEffect                      html  
    countValuesToPredict                    html  
    ex.corrected.data                       html  
    findOutsideValues                       html  
    gdepoch                                 html  
    imputeMissingData                       html  
    imputeMissingDataForBlock               html  
    localLoss                               html  
    loss                                    html  
    makeBoxplot                             html  
    preprocessBEclear                       html  
    replaceOutsideValues                    html  
    runGradientDescent                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BEclear' ...
** libs
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"D:/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c localLoss.cpp -o localLoss.o
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o BEclear.dll tmp.def RcppExports.o localLoss.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.14-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.14-bioc/meat/BEclear.buildbin-libdir/BEclear/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BEclear' as BEclear_2.9.2.zip
* DONE (BEclear)