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This page was generated on 2022-01-26 13:06:12 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for Autotuner on tokay2


To the developers/maintainers of the Autotuner package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Autotuner.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 100/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Autotuner 1.8.0  (landing page)
Craig McLean
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/Autotuner
git_branch: RELEASE_3_14
git_last_commit: 64c9943
git_last_commit_date: 2021-10-26 12:53:11 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: Autotuner
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Autotuner_1.8.0.tar.gz && rm -rf Autotuner.buildbin-libdir && mkdir Autotuner.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Autotuner.buildbin-libdir Autotuner_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Autotuner_1.8.0.zip && rm Autotuner_1.8.0.tar.gz Autotuner_1.8.0.zip
StartedAt: 2022-01-25 05:12:40 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 05:14:26 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 105.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Autotuner_1.8.0.tar.gz && rm -rf Autotuner.buildbin-libdir && mkdir Autotuner.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Autotuner.buildbin-libdir Autotuner_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Autotuner_1.8.0.zip && rm Autotuner_1.8.0.tar.gz Autotuner_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1 3762k    1 47275    0     0   115k      0  0:00:32 --:--:--  0:00:32  115k
  9 3762k    9  346k    0     0   222k      0  0:00:16  0:00:01  0:00:15  222k
  9 3762k    9  346k    0     0   134k      0  0:00:27  0:00:02  0:00:25  134k
  9 3762k    9  346k    0     0  98880      0  0:00:38  0:00:03  0:00:35 98888
  9 3762k    9  346k    0     0  77048      0  0:00:50  0:00:04  0:00:46 77046
  9 3762k    9  346k    0     0  63108      0  0:01:01  0:00:05  0:00:56 58895
  9 3762k    9  346k    0     0  53444      0  0:01:12  0:00:06  0:01:06     0
  9 3762k    9  346k    0     0  46345      0  0:01:23  0:00:07  0:01:16     0
  9 3762k    9  346k    0     0  40912      0  0:01:34  0:00:08  0:01:26     0
  9 3762k    9  346k    0     0  36620      0  0:01:45  0:00:09  0:01:36     0
  9 3762k    9  346k    0     0  33142      0  0:01:56  0:00:10  0:01:46     0
  9 3762k    9  346k    0     0  30306      0  0:02:07  0:00:11  0:01:56     0
  9 3762k    9  346k    0     0  27886      0  0:02:18  0:00:12  0:02:06     0
  9 3762k    9  346k    0     0  25822      0  0:02:29  0:00:13  0:02:16     0
  9 3762k    9  346k    0     0  24043      0  0:02:40  0:00:14  0:02:26     0
  9 3762k    9  346k    0     0  22493      0  0:02:51  0:00:15  0:02:36     0
  9 3762k    9  358k    0     0  22125      0  0:02:54  0:00:16  0:02:38  2498
 87 3762k   87 3280k    0     0   188k      0  0:00:19  0:00:17  0:00:02  629k
100 3762k  100 3762k    0     0   215k      0  0:00:17  0:00:17 --:--:--  909k

install for i386

* installing *source* package 'Autotuner' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Autotuner'
    finding HTML links ... done
    Autotuner-class                         html  
    EICparams                               html  
    TIC_params                              html  
    ThresholdingAlgo                        html  
    checkBounds                             html  
    checkEICPeaks                           html  
    createAutotuner                         html  
    dissectScans                            html  
    eicParamsEsts                           html  
    estimatePPM                             html  
    estimateSNThresh                        html  
    extract_peaks                           html  
    filterPeaksfromNoise                    html  
    filterPpmError                          html  
    findPeakWidth                           html  
    findTruePeaks                           html  
    getAutoFactorCol                        html  
    getAutoFile_col                         html  
    getAutoFile_paths                       html  
    getAutoIntensity                        html  
    getAutoMetadata                         html  
    getAutoPeak_difference                  html  
    getAutoPeak_table                       html  
    getAutoPeaks                            html  
    getAutoTime                             html  
    initialize-Autotuner-method             html  
    isolatePeaks                            html  
    mzDb                                    html  
    observedPeak                            html  
    peak_time_difference                    html  
    peakwidth_est                           html  
    peakwidth_table                         html  
    plot_peaks                              html  
    plot_signals                            html  
    returnParams                            html  
    setAutoFactorCol                        html  
    setAutoFile_col                         html  
    setAutoFile_paths                       html  
    setAutoIntensity                        html  
    setAutoMetadata                         html  
    setAutoPeak_difference                  html  
    setAutoPeak_table                       html  
    setAutoPeaks                            html  
    setAutoTime                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Autotuner' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Autotuner' as Autotuner_1.8.0.zip
* DONE (Autotuner)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'Autotuner' successfully unpacked and MD5 sums checked