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This page was generated on 2022-01-26 13:06:11 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for AnnotationForge on tokay2


To the developers/maintainers of the AnnotationForge package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AnnotationForge.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 62/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationForge 1.36.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/AnnotationForge
git_branch: RELEASE_3_14
git_last_commit: 523b5f0
git_last_commit_date: 2021-10-26 12:03:32 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: AnnotationForge
Version: 1.36.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AnnotationForge_1.36.0.tar.gz && rm -rf AnnotationForge.buildbin-libdir && mkdir AnnotationForge.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationForge.buildbin-libdir AnnotationForge_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AnnotationForge_1.36.0.zip && rm AnnotationForge_1.36.0.tar.gz AnnotationForge_1.36.0.zip
StartedAt: 2022-01-25 04:57:36 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 05:03:17 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 341.0 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AnnotationForge_1.36.0.tar.gz && rm -rf AnnotationForge.buildbin-libdir && mkdir AnnotationForge.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationForge.buildbin-libdir AnnotationForge_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AnnotationForge_1.36.0.zip && rm AnnotationForge_1.36.0.tar.gz AnnotationForge_1.36.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 11 3289k   11  381k    0     0  1281k      0  0:00:02 --:--:--  0:00:02 1282k
100 3289k  100 3289k    0     0  2989k      0  0:00:01  0:00:01 --:--:-- 2992k

install for i386

* installing *source* package 'AnnotationForge' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'AnnotationForge'
    finding HTML links ... done
    AnnDbPkg-maker                          html  
    finding level-2 HTML links ... done

    available.db0pkgs                       html  
    generateSeqnames_db                     html  
    getProbeDataAffy                        html  
    getProbeData_1lq                        html  
    makeChipPackageFromDataFrames           html  
    makeInpDb                               html  
    makeOrgPackage                          html  
    makeOrgPackageFromNCBI                  html  
    makeProbePackage                        html  
    sqlForge-makeCHIPDB                     html  
    sqlForge-popDB                          html  
    sqlForge-wrapDBPackages                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'AnnotationForge' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationForge' as AnnotationForge_1.36.0.zip
* DONE (AnnotationForge)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'AnnotationForge' successfully unpacked and MD5 sums checked