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This page was generated on 2021-10-18 12:03:35 -0400 (Mon, 18 Oct 2021).

INSTALL results for ACME on nebbiolo2

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raw results

Package 14/2060HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ACME 2.49.0  (landing page)
Sean Davis
Snapshot Date: 2021-10-17 14:50:03 -0400 (Sun, 17 Oct 2021)
git_url: https://git.bioconductor.org/packages/ACME
git_branch: master
git_last_commit: adb1ab3
git_last_commit_date: 2021-05-19 11:38:59 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ACME
Version: 2.49.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL ACME
StartedAt: 2021-10-17 16:03:37 -0400 (Sun, 17 Oct 2021)
EndedAt: 2021-10-17 16:03:43 -0400 (Sun, 17 Oct 2021)
EllapsedTime: 5.8 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL ACME
###
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* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘ACME’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c windowChisq.c -o windowChisq.o
windowChisq.c: In function ‘windowChisq’:
windowChisq.c:58:14: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
   58 |    firstprobe>0) {
      |    ~~~~~~~~~~^~
windowChisq.c:63:13: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
   63 |    lastprobe<(na-1)) {
      |    ~~~~~~~~~^~~~~~~
windowChisq.c:21:11: warning: unused variable ‘xa’ [-Wunused-variable]
   21 |   double *xa,*xlocations,*xchivals;
      |           ^~
windowChisq.c: At top level:
windowChisq.c:86:20: warning: initialization of ‘void * (*)()’ from incompatible pointer type ‘struct SEXPREC * (*)(struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *)’ [-Wincompatible-pointer-types]
   86 |     {"windowChisq",&windowChisq,5},
      |                    ^
windowChisq.c:86:20: note: (near initialization for ‘callMethods[0].fun’)
gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o ACME.so windowChisq.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-ACME/00new/ACME/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ACME)