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This page was generated on 2021-07-23 15:06:15 -0400 (Fri, 23 Jul 2021).

INSTALL results for pogos on tokay2

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raw results

Package 1411/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pogos 1.12.0  (landing page)
VJ Carey
Snapshot Date: 2021-07-22 04:50:13 -0400 (Thu, 22 Jul 2021)
URL: https://git.bioconductor.org/packages/pogos
Branch: RELEASE_3_13
Last Commit: 9ddc3d7
Last Changed Date: 2021-05-19 12:32:46 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: pogos
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/pogos_1.12.0.tar.gz && rm -rf pogos.buildbin-libdir && mkdir pogos.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pogos.buildbin-libdir pogos_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL pogos_1.12.0.zip && rm pogos_1.12.0.tar.gz pogos_1.12.0.zip
StartedAt: 2021-07-22 08:22:03 -0400 (Thu, 22 Jul 2021)
EndedAt: 2021-07-22 08:22:56 -0400 (Thu, 22 Jul 2021)
EllapsedTime: 53.5 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/pogos_1.12.0.tar.gz && rm -rf pogos.buildbin-libdir && mkdir pogos.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pogos.buildbin-libdir pogos_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL pogos_1.12.0.zip && rm pogos_1.12.0.tar.gz pogos_1.12.0.zip
###
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100 27565  100 27565    0     0   295k      0 --:--:-- --:--:-- --:--:--  299k

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'pogos/vignettes/pogos.Rmd' to 'pogos/README.md'
* installing *source* package 'pogos' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'pogos'
    finding HTML links ... done
    DRProfSet                               html  
    DRTraceSet                              html  
    basicDecoder                            html  
    compoundsByCell                         html  
    compounds_v1                            html  
    iriCCLE                                 html  
    rxdbQuery_v1                            html  
    sub-DRProfSet-character-method          html  
    topEndpoints_v1                         html  
    traces                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'pogos/vignettes/pogos.Rmd' to 'pogos/README.md'
* installing *source* package 'pogos' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pogos' as pogos_1.12.0.zip
* DONE (pogos)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'pogos' successfully unpacked and MD5 sums checked