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BUILD results for ToPASeq on machv2

This page was generated on 2021-06-14 14:05:58 -0400 (Mon, 14 Jun 2021).

Package 1934/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ToPASeq 1.26.0  (landing page)
Ivana Ihnatova
Snapshot Date: 2021-06-13 06:50:09 -0400 (Sun, 13 Jun 2021)
URL: https://git.bioconductor.org/packages/ToPASeq
Branch: RELEASE_3_13
Last Commit: 39671a5
Last Changed Date: 2021-05-19 12:09:12 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped
To the developers/maintainers of the ToPASeq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ToPASeq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

Summary

Package: ToPASeq
Version: 1.26.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ToPASeq
StartedAt: 2021-06-13 15:02:32 -0400 (Sun, 13 Jun 2021)
EndedAt: 2021-06-13 15:05:39 -0400 (Sun, 13 Jun 2021)
EllapsedTime: 186.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ToPASeq
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* checking for file ‘ToPASeq/DESCRIPTION’ ... OK
* preparing ‘ToPASeq’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ToPASeq.Rmd’ using rmarkdown
--- finished re-building ‘ToPASeq.Rmd’

--- re-building ‘ToPASeq_allMethods.Rmd’ using rmarkdown
Quitting from lines 168-170 (ToPASeq_allMethods.Rmd) 
Error: processing vignette 'ToPASeq_allMethods.Rmd' failed with diagnostics:
Unexpected edge type ENSEMBL Please modify edgeAttrs
--- failed re-building ‘ToPASeq_allMethods.Rmd’

SUMMARY: processing the following file failed:
  ‘ToPASeq_allMethods.Rmd’

Error: Vignette re-building failed.
Execution halted