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This page was generated on 2021-06-17 02:38:27 -0400 (Thu, 17 Jun 2021).

BUILD results for PoTRA on nebbiolo1

To the developers/maintainers of the PoTRA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PoTRA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1416/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PoTRA 1.8.0  (landing page)
Valentin Dinu
Snapshot Date: 2021-06-15 06:50:12 -0400 (Tue, 15 Jun 2021)
URL: https://git.bioconductor.org/packages/PoTRA
Branch: RELEASE_3_13
Last Commit: df83f71
Last Changed Date: 2021-05-19 12:41:52 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: PoTRA
Version: 1.8.0
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data PoTRA
StartedAt: 2021-06-15 10:04:37 -0400 (Tue, 15 Jun 2021)
EndedAt: 2021-06-15 10:06:25 -0400 (Tue, 15 Jun 2021)
EllapsedTime: 107.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data PoTRA
###
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* checking for file ‘PoTRA/DESCRIPTION’ ... OK
* preparing ‘PoTRA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘PoTRA.Rmd’ using rmarkdown
* installing *source* package ‘repmis’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (repmis)
Quitting from lines 223-227 (PoTRA.Rmd) 
Error: processing vignette 'PoTRA.Rmd' failed with diagnostics:
no database "biocarta" for species "hsapiens"
--- failed re-building ‘PoTRA.Rmd’

SUMMARY: processing the following file failed:
  ‘PoTRA.Rmd’

Error: Vignette re-building failed.
Execution halted