Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2021-08-02 15:05:17 -0400 (Mon, 02 Aug 2021).

INSTALL results for MAIT on tokay2

To the developers/maintainers of the MAIT package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MAIT.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1025/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MAIT 1.26.0  (landing page)
Pol Sola-Santos
Snapshot Date: 2021-08-01 04:50:10 -0400 (Sun, 01 Aug 2021)
URL: https://git.bioconductor.org/packages/MAIT
Branch: RELEASE_3_13
Last Commit: 5d0e003
Last Changed Date: 2021-05-19 12:08:43 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MAIT
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MAIT_1.26.0.tar.gz && rm -rf MAIT.buildbin-libdir && mkdir MAIT.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MAIT.buildbin-libdir MAIT_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MAIT_1.26.0.zip && rm MAIT_1.26.0.tar.gz MAIT_1.26.0.zip
StartedAt: 2021-08-01 10:16:43 -0400 (Sun, 01 Aug 2021)
EndedAt: 2021-08-01 10:18:31 -0400 (Sun, 01 Aug 2021)
EllapsedTime: 108.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MAIT_1.26.0.tar.gz && rm -rf MAIT.buildbin-libdir && mkdir MAIT.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MAIT.buildbin-libdir MAIT_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MAIT_1.26.0.zip && rm MAIT_1.26.0.tar.gz MAIT_1.26.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2190k  100 2190k    0     0  6020k      0 --:--:-- --:--:-- --:--:-- 6033k

install for i386

* installing *source* package 'MAIT' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'scores' in package 'MAIT'
Creating a new generic function for 'loadings' in package 'MAIT'
** help
*** installing help indices
  converting help for package 'MAIT'
    finding HTML links ... done
    Biotransformations                      html  
    Database                                html  
    FisherLSD                               html  
    LSDResults                              html  
    MAIT-class                              html  
    finding level-2 HTML links ... done

    MAIT.FeatureData-class                  html  
    MAIT.FeatureInfo-class                  html  
    MAIT.Parameters-class                   html  
    MAIT.PhenoData-class                    html  
    MAIT.RawData-class                      html  
    MAIT.Validation-class                   html  
    MAIT_dataSet                            html  
    MAITbuilder                             html  
    PCAplot3d                               html  
    PLSDA                                   html  
    SearchCand                              html  
    Validation                              html  
    annotateBiotransf                       html  
    biotransformationsTable                 html  
    classNum                                html  
    classes                                 html  
    classifRatioClasses                     html  
    featureID                               html  
    featureInfo                             html  
    featureSigID                            html  
    getScoresTable                          html  
    identifyMetabolites                     html  
    inBetween                               html  
    loadings                                html  
    metaboliteTable                         html  
    method                                  html  
    model                                   html  
    models                                  html  
    negAdducts                              html  
    ovClassifRatio                          html  
    ovClassifRatioTable                     html  
    parameters                              html  
    pcaLoadings                             html  
    pcaModel                                html  
    pcaScores                               html  
    peakAggregation                         html  
    peakAnnotation                          html  
    plotBoxplot                             html  
    plotHeatmap                             html  
    plotPCA                                 html  
    plotPLS                                 html  
    plsLoadings                             html  
    plsModel                                html  
    plsScores                               html  
    posAdducts                              html  
    project                                 html  
    pvalues                                 html  
    pvaluesCorrection                       html  
    rawData                                 html  
    removeOnePeakSpectra                    html  
    resultsPath                             html  
    retrieveSpectrum                        html  
    sampleProcessing                        html  
    scores                                  html  
    selectK                                 html  
    selectPLScomp                           html  
    sigPeaksTable                           html  
    spectralAnova                           html  
    spectralFUN                             html  
    spectralKruskal                         html  
    spectralSigFeatures                     html  
    spectralTStudent                        html  
    spectralWelch                           html  
    spectralWilcox                          html  
    successRatio                            html  
    writeExcelTable                         html  
    writeParameterTable                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MAIT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MAIT' as MAIT_1.26.0.zip
* DONE (MAIT)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'MAIT' successfully unpacked and MD5 sums checked