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This page was generated on 2021-08-02 15:05:05 -0400 (Mon, 02 Aug 2021).

INSTALL results for BgeeDB on tokay2

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raw results

Package 143/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BgeeDB 2.18.1  (landing page)
Julien Wollbrett , Julien Roux , Andrea Komljenovic , Frederic Bastian
Snapshot Date: 2021-08-01 04:50:10 -0400 (Sun, 01 Aug 2021)
URL: https://git.bioconductor.org/packages/BgeeDB
Branch: RELEASE_3_13
Last Commit: 6e3f28d
Last Changed Date: 2021-06-15 22:49:49 -0400 (Tue, 15 Jun 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: BgeeDB
Version: 2.18.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BgeeDB_2.18.1.tar.gz && rm -rf BgeeDB.buildbin-libdir && mkdir BgeeDB.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeDB.buildbin-libdir BgeeDB_2.18.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BgeeDB_2.18.1.zip && rm BgeeDB_2.18.1.tar.gz BgeeDB_2.18.1.zip
StartedAt: 2021-08-01 10:13:55 -0400 (Sun, 01 Aug 2021)
EndedAt: 2021-08-01 10:14:54 -0400 (Sun, 01 Aug 2021)
EllapsedTime: 59.1 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BgeeDB_2.18.1.tar.gz && rm -rf BgeeDB.buildbin-libdir && mkdir BgeeDB.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeDB.buildbin-libdir BgeeDB_2.18.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BgeeDB_2.18.1.zip && rm BgeeDB_2.18.1.tar.gz BgeeDB_2.18.1.zip
###
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100 70391  100 70391    0     0   684k      0 --:--:-- --:--:-- --:--:--  687k

install for i386

* installing *source* package 'BgeeDB' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
  converting help for package 'BgeeDB'
    finding HTML links ... done
    Bgee-class                              html  
    deleteLocalData                         html  
    deleteOldData                           html  
    formatData                              html  
    geneList                                html  
    getAnnotation                           html  
    getData                                 html  
    listBgeeRelease                         html  
    listBgeeSpecies                         html  
    loadTopAnatData                         html  
    makeTable                               html  
    topAnat                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package can be loaded from final location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BgeeDB' ...
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
* MD5 sums
packaged installation of 'BgeeDB' as BgeeDB_2.18.1.zip
* DONE (BgeeDB)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'BgeeDB' successfully unpacked and MD5 sums checked