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This page was generated on 2021-07-23 15:05:56 -0400 (Fri, 23 Jul 2021).

INSTALL results for AnnotationHubData on tokay2

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raw results

Package 67/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationHubData 1.22.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-07-22 04:50:13 -0400 (Thu, 22 Jul 2021)
URL: https://git.bioconductor.org/packages/AnnotationHubData
Branch: RELEASE_3_13
Last Commit: c2a76fb
Last Changed Date: 2021-05-19 12:15:21 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: AnnotationHubData
Version: 1.22.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AnnotationHubData_1.22.0.tar.gz && rm -rf AnnotationHubData.buildbin-libdir && mkdir AnnotationHubData.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationHubData.buildbin-libdir AnnotationHubData_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AnnotationHubData_1.22.0.zip && rm AnnotationHubData_1.22.0.tar.gz AnnotationHubData_1.22.0.zip
StartedAt: 2021-07-22 10:29:01 -0400 (Thu, 22 Jul 2021)
EndedAt: 2021-07-22 10:30:14 -0400 (Thu, 22 Jul 2021)
EllapsedTime: 72.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AnnotationHubData_1.22.0.tar.gz && rm -rf AnnotationHubData.buildbin-libdir && mkdir AnnotationHubData.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationHubData.buildbin-libdir AnnotationHubData_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AnnotationHubData_1.22.0.zip && rm AnnotationHubData_1.22.0.tar.gz AnnotationHubData_1.22.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  184k  100  184k    0     0  1186k      0 --:--:-- --:--:-- --:--:-- 1196k

install for i386

* installing *source* package 'AnnotationHubData' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'AnnotationHubData'
    finding HTML links ... done
    AnnotationHubData-package               html  
    AnnotationHubMetadata-class             html  
REDIRECT:topic	 class:HubMetadata -> AnnotationHubMetadata-class.html [ FAIL ]
REDIRECT:topic	 class:AnnotationHubMetadata -> AnnotationHubMetadata-class.html [ FAIL ]
REDIRECT:topic	 metadata<- -> AnnotationHubMetadata-class.html [ FAIL ]
REDIRECT:topic	 metadata<-,HubMetadata,list-method -> AnnotationHubMetadata-class.html [ FAIL ]
REDIRECT:topic	 hubError<- -> AnnotationHubMetadata-class.html [ FAIL ]
REDIRECT:topic	 hubError<-,list,character-method -> AnnotationHubMetadata-class.html [ FAIL ]
REDIRECT:topic	 hubError<-,HubMetadata,character-method -> AnnotationHubMetadata-class.html [ FAIL ]
    ImportPreparer-class                    html  
    flog                                    html  
    makeAnnotationHubMetadata               html  
    makeEnsemblFasta                        html  
    makeGencodeFasta                        html  
    makeStandardOrgDbs                      html  
    updateResources                         html  
    upload_to_S3                            html  
    validationFunctions                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'AnnotationHubData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationHubData' as AnnotationHubData_1.22.0.zip
* DONE (AnnotationHubData)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'AnnotationHubData' successfully unpacked and MD5 sums checked