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BUILD BIN report for crossmeta on tokay1

This page was generated on 2021-05-05 12:11:37 -0400 (Wed, 05 May 2021).

To the developers/maintainers of the crossmeta package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 400/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
crossmeta 1.16.1  (landing page)
Alex Pickering
Snapshot Date: 2021-05-04 14:50:13 -0400 (Tue, 04 May 2021)
URL: https://git.bioconductor.org/packages/crossmeta
Branch: RELEASE_3_12
Last Commit: 02d63d6
Last Changed Date: 2020-11-02 13:21:38 -0400 (Mon, 02 Nov 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: crossmeta
Version: 1.16.1
Command: rm -rf crossmeta.buildbin-libdir && mkdir crossmeta.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=crossmeta.buildbin-libdir crossmeta_1.16.1.tar.gz
StartedAt: 2021-05-05 08:53:12 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 08:53:51 -0400 (Wed, 05 May 2021)
EllapsedTime: 39.7 seconds
RetCode: 0
Status:   OK   
PackageFile: crossmeta_1.16.1.zip
PackageFileSize: 2.786 MiB

Command output

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###
### Running command:
###
###   rm -rf crossmeta.buildbin-libdir && mkdir crossmeta.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=crossmeta.buildbin-libdir crossmeta_1.16.1.tar.gz
###
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install for i386

* installing *source* package 'crossmeta' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'crossmeta'
    finding HTML links ... done
    addContrastInput                        html  
    add_adjusted                            html  
    add_sources                             html  
    bulkAnnot                               html  
    bulkAnnotInput                          html  
    bulkForm                                html  
    bulkFormInput                           html  
    bulkPage                                html  
    bulkPageUI                              html  
    bulkTable                               html  
    bulkTableOuput                          html  
    ch2_subset                              html  
    delContrastsInput                       html  
    diff_expr                               html  
    es_meta                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpI7p9QR/R.INSTALL4c04f7a2112/crossmeta/man/es_meta.Rd:38: file link 'zScores' in package 'GeneMeta' does not exist and so has been treated as a topic
    exprs.MA                                html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpI7p9QR/R.INSTALL4c04f7a2112/crossmeta/man/exprs.MA.Rd:17: file link 'plotDensities.MAList' in package 'limma' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpI7p9QR/R.INSTALL4c04f7a2112/crossmeta/man/exprs.MA.Rd:17: file link 'exprs.MA' in package 'limma' does not exist and so has been treated as a topic
    fix_illum_headers                       html  
    finding level-2 HTML links ... done

    format_dl_annot                         html  
    format_up_annot                         html  
    get_ch2_mod                             html  
    get_group_levels                        html  
    get_palette                             html  
    get_raw                                 html  
    get_sva_mods                            html  
    gs.names                                html  
    gslist                                  html  
    ilmn.nnum                               html  
    iqr_replicates                          html  
    is_invertible                           html  
    load_agil_plat                          html  
    load_diff                               html  
    load_raw                                html  
    open_raw_illum                          html  
    phenoData.ch2                           html  
    prefix_illum_headers                    html  
    query_ref                               html  
    run_select_contrasts                    html  
    run_sva                                 html  
    setup_prev                              html  
    symbol_annot                            html  
    to_eset                                 html  
    to_ma                                   html  
    validate_up_annot                       html  
    which_max_iqr                           html  
    xls_to_txt                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'crossmeta' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'crossmeta' as crossmeta_1.16.1.zip
* DONE (crossmeta)